Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 RNA5SP68-201ENST00000363885 119 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 B3GNT2P1-201ENST00000434960 952 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AP001025.2-201ENST00000490908 477 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC009977.1-201ENST00000586015 570 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 SCN1A-220ENST00000641603 12506 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 MIR26A1-201ENST00000362205 77 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AL139039.1-201ENST00000401900 692 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 NCSTNP1-201ENST00000406229 144 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 RNA5SP148-201ENST00000516527 94 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC099063.2-201ENST00000446360 662 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC093663.2-201ENST00000484625 313 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC019227.1-201ENST00000526902 510 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 DNAJC19P3-201ENST00000594491 331 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC139713.2-215ENST00000641428 5037 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 XIAPP3-201ENST00000312918 795 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 MIR518C-201ENST00000384822 101 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 TOMM20P4-201ENST00000427861 435 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 MTCYBP31-201ENST00000438855 1122 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 WASF1P1-201ENST00000447560 1131 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC117522.3-201ENST00000507974 584 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 SNORA64.4-201ENST00000516632 81 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AP003102.1-201ENST00000525638 661 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 TGIF1P1-201ENST00000558095 802 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AL356274.1-201ENST00000617064 410 ntBASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ALMS1Q8TCU4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC087499.2-201ENST00000432861 149 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 MIR2276-201ENST00000516886 89 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC104027.1-201ENST00000521887 300 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC011492.1-201ENST00000600023 315 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 U3.6-201ENST00000363622 211 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 RPL7P25-201ENST00000404151 721 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 MTCO1P52-201ENST00000433928 531 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 HMGB3P6-201ENST00000444896 598 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 IFNWP4-201ENST00000453148 294 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 VTA1P2-201ENST00000520205 911 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC103810.6-201ENST00000606708 136 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC009039.2-201ENST00000624524 529 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC063976.3-201ENST00000426849 329 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 UBE2D3P1-201ENST00000436669 444 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 EEF1A1P37-201ENST00000522748 715 ntBASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.94□□□□□ -2.1
ALMS1Q8TCU4 MIR30E-201ENST00000362104 92 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms