Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU2-10P-201ENST00000516375 211 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 SCARNA16.2-201ENST00000516520 172 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AP003385.6-201ENST00000531603 374 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AP004609.2-201ENST00000532177 190 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 LSM6P2-201ENST00000552208 177 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 HSBP1P1-201ENST00000555205 166 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 VN1R84P-201ENST00000593697 235 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 Z98751.3-201ENST00000604447 521 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AC092266.1-201ENST00000610958 165 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AC073488.3-201ENST00000631611 778 ntBASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LYSMD3Q7Z3D4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 Y_RNA.785-201ENST00000384290 109 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 U3.25-201ENST00000391209 220 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC015977.1-201ENST00000418887 292 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC243428.1-201ENST00000421099 264 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 RPL12P12-201ENST00000424633 501 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC092651.1-201ENST00000426110 312 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC016027.5-201ENST00000427227 210 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 RPL37P1-201ENST00000432310 284 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 HMGB3P21-201ENST00000452483 547 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 RN7SL352P-201ENST00000466002 277 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 RPL39P38-201ENST00000467018 153 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC098847.1-201ENST00000473094 348 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC021382.1-201ENST00000483523 359 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC114728.1-201ENST00000488289 483 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC068305.1-201ENST00000497406 726 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC008945.1-201ENST00000505144 499 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC112191.2-201ENST00000522428 333 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC115085.1-201ENST00000588924 229 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 MIR132-201ENST00000591554 101 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC096772.1-201ENST00000609146 564 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC025034.2-201ENST00000623264 286 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC091903.1-201ENST00000624322 454 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 AC005261.2-201ENST00000593427 4258 ntBASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LYSMD3Q7Z3D4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AC235565.1-201ENST00000456962 1325 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 Y_RNA.39-201ENST00000362620 98 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RNU6-1287P-201ENST00000362914 107 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RNU6-746P-201ENST00000384112 109 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RNU6-1060P-201ENST00000384664 107 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 SNORA77.2-201ENST00000408571 112 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AC245096.1-201ENST00000413104 546 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AL590632.1-201ENST00000424289 371 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RPL7P46-201ENST00000425129 740 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 USMG5P1-201ENST00000425964 177 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 HIGD1AP11-201ENST00000438361 280 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AL121871.1-201ENST00000443413 436 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 PRELID3BP1-201ENST00000457142 540 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RPS23P3-201ENST00000470993 430 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 FO393415.2-201ENST00000480085 343 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RN7SL809P-201ENST00000482040 297 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 LSM3P4-201ENST00000502948 309 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 AC009901.1-201ENST00000506703 541 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 Y_RNA.673-201ENST00000516306 88 ntBASIC6.06□□□□□ -1.44
LYSMD3Q7Z3D4 RN7SKP238-201ENST00000516483 249 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms