Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 HMGB1P22-201ENST00000505315 124 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 SNORA31.9-201ENST00000516429 84 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP468-201ENST00000516782 93 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 IGKV2-23-201ENST00000518729 323 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 EEF1A1P37-201ENST00000522748 715 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC105233.3-201ENST00000531125 744 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 CYCSP29-201ENST00000533731 318 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC023050.2-201ENST00000544968 387 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 PARP1P2-201ENST00000556806 195 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AL132657.2-201ENST00000564417 358 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 SNORD84-203ENST00000584275 78 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC107982.3-201ENST00000584957 985 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC091057.2-201ENST00000602594 792 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC022022.2-201ENST00000602989 360 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC128687.1-201ENST00000605304 619 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC007349.4-201ENST00000608114 532 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 VIS1.1-201ENST00000610517 203 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC109809.1-201ENST00000619665 545 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AP005264.7-201ENST00000625003 745 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC006927.4-201ENST00000639187 543 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AC107982.1-201ENST00000507171 1300 ntBASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP54Q7Z3B4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 SNORA70.2-201ENST00000364506 135 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC068538.1-201ENST00000376856 336 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 MIR506-201ENST00000384998 124 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AL049693.1-201ENST00000402760 611 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 RAB28P1-201ENST00000411517 641 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 GSTA7P-201ENST00000438425 448 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 RPL23AP89-201ENST00000439324 255 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 MTCO1P48-201ENST00000448024 1096 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC006517.1-201ENST00000480485 328 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC013828.1-201ENST00000481845 158 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP154-201ENST00000516193 111 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 SNORA31.20-201ENST00000517111 133 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 OR4A12P-201ENST00000530847 918 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC063950.1-201ENST00000552036 308 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 MRPS35P3-201ENST00000603189 709 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC110741.2-201ENST00000605278 268 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AP002782.1-201ENST00000623107 614 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 OR52H1-202ENST00000641796 1061 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 AC002546.1-201ENST00000588041 2504 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 MTND4P34-201ENST00000572715 1371 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.86□□□□□ -1.79
NUP54Q7Z3B4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC091152.2-201ENST00000591628 2569 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP388-201ENST00000362584 119 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 Y_RNA.192-201ENST00000363977 102 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RNU6-730P-201ENST00000383954 104 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 MIR93-201ENST00000385024 80 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms