Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL359821.1-201ENST00000605519 182 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 GTF2H2B-203ENST00000508065 1432 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 AC092436.1-201ENST00000506450 503 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 AC068657.1-201ENST00000520807 306 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13CQ709C8 AC019072.1-201ENST00000604535 1551 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 PTP4A1P5-201ENST00000420305 455 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 HIGD1AP2-201ENST00000446367 280 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 RPL5P16-201ENST00000471467 790 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 AC106872.3-201ENST00000495104 446 ntBASIC2.14□□□□□ -2.07
VPS13CQ709C8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13CQ709C8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
VPS13CQ709C8 Y_RNA.269-201ENST00000364685 89 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 PRELID3BP7-201ENST00000503606 469 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC006445.2-201ENST00000510061 472 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC093831.2-201ENST00000624393 3427 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 Y_RNA.116-201ENST00000363292 103 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 OR5H3P-201ENST00000502817 919 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC034244.2-201ENST00000514668 858 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC141257.3-201ENST00000572906 215 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 MIR5047-201ENST00000579212 100 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 SNORA35B-201ENST00000607417 129 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC103798.2-201ENST00000624292 632 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC109315.1-201ENST00000584143 1347 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC245054.2-201ENST00000415639 319 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AL135786.1-201ENST00000415892 214 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 CYCSP49-201ENST00000420810 319 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 FCF1P1-201ENST00000432690 571 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 RPL7P52-201ENST00000449200 742 ntBASIC2.13□□□□□ -2.07
VPS13CQ709C8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13CQ709C8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13CQ709C8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 RPL7P10-201ENST00000417407 739 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 SAGE4P-201ENST00000442271 3381 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC003982.1-202ENST00000469928 248 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC108729.3-201ENST00000513484 108 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 FABP5P12-201ENST00000515543 389 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 MTND5P6-201ENST00000422338 1798 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 SNORA25.9-201ENST00000365087 128 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 RPLP0P7-201ENST00000416050 667 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC055855.1-201ENST00000489563 579 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC009101.1-201ENST00000568135 242 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC022069.1-201ENST00000582910 658 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 CRYM-AS1-204ENST00000637983 556 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 TAF9P1-201ENST00000445421 515 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 TAF9P2-201ENST00000454958 515 ntBASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.12□□□□□ -2.07
VPS13CQ709C8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13CQ709C8 AC096638.1-201ENST00000444678 216 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 RN7SL636P-201ENST00000497504 294 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC116337.1-201ENST00000509680 687 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms