Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 RNA5SP22-201ENST00000365393 109 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL121972.1-201ENST00000402023 252 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 RNA5SP146-201ENST00000410743 123 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 TPT1P2-201ENST00000413105 503 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 PDSS1P1-201ENST00000422953 1114 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 RPL23AP25-201ENST00000430973 463 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 TAF9P1-201ENST00000445421 515 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 TAF9P2-201ENST00000454958 515 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 RPS6P4-201ENST00000494693 758 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 MTCO3P44-201ENST00000510977 541 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC093840.1-201ENST00000511599 336 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 RPL12P22-201ENST00000519073 490 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AF131215.7-201ENST00000602443 707 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AP000811.1-201ENST00000603803 651 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC064872.1-201ENST00000604823 1072 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL590392.1-201ENST00000604960 446 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL356218.2-201ENST00000605264 187 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC092653.1-201ENST00000608509 531 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL133243.1-201ENST00000614487 366 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC026368.1-201ENST00000614934 690 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 MIR6891-201ENST00000618788 93 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AC009318.4-201ENST00000620496 486 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AL390237.1-201ENST00000404226 1415 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 SNORA51.6-201ENST00000384151 125 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC016769.3-201ENST00000396562 315 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 SDHCP2-201ENST00000398565 501 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AL024474.1-201ENST00000404655 591 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 VN1R8P-201ENST00000407739 893 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RNU6-920P-201ENST00000410926 92 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 ELOCP19-201ENST00000411919 318 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RPS12P10-201ENST00000427031 377 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC244035.1-201ENST00000430042 390 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 KCTD10P1-201ENST00000434203 625 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RPL21P112-201ENST00000434403 463 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AL121877.1-201ENST00000453704 622 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RPL7P1-201ENST00000468161 747 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RPL7P9-201ENST00000468715 747 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC011276.1-201ENST00000469688 323 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC103987.1-201ENST00000473394 348 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TMED11P-201ENST00000479478 690 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 KLRA1P-201ENST00000503499 986 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC007687.1-201ENST00000602704 304 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC008782.1-201ENST00000603386 430 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 AC013562.2-201ENST00000611632 603 ntBASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms