Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC139365.2-201ENST00000517972 253 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDH1Q08174 MTND4P7-201ENST00000523876 130 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDH1Q08174 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 RN7SL802P-201ENST00000577858 299 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC113194.1-201ENST00000606037 500 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AP000843.1-201ENST00000624880 701 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 AC079776.5-201ENST00000641920 211 ntBASIC5.56□□□□□ -1.52
PCDH1Q08174 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDH1Q08174 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDH1Q08174 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PCDH1Q08174 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDH1Q08174 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
PCDH1Q08174 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PCDH1Q08174 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDH1Q08174 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 RNU6-1243P-201ENST00000364028 107 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 RN7SKP275-201ENST00000364626 301 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 Y_RNA.378-201ENST00000365652 113 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 Y_RNA.401-201ENST00000383965 117 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 RNU6-278P-201ENST00000390945 109 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 MIR1203-201ENST00000408812 85 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 HMGN1P24-201ENST00000412282 298 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 BX323014.1-201ENST00000412876 237 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDH1Q08174 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC068533.1-201ENST00000418542 415 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AL358176.3-201ENST00000420757 454 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AL035660.1-201ENST00000422041 222 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 ARL2BPP10-201ENST00000446487 531 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 NOP56P2-201ENST00000447491 769 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AC068305.1-201ENST00000497406 726 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC016559.2-201ENST00000510759 359 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 GAPDHP62-201ENST00000515313 990 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 RNA5SP438-201ENST00000516561 112 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 snoU109.6-201ENST00000516831 118 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC109635.4-202ENST00000531666 412 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AL358913.1-201ENST00000554342 121 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 COX6CP7-201ENST00000597056 208 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 uc_338.11-201ENST00000619132 160 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
PCDH1Q08174 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDH1Q08174 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDH1Q08174 AC006206.1-201ENST00000544842 3387 ntBASIC5.55□□□□□ -1.52
PCDH1Q08174 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDH1Q08174 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH1Q08174 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms