Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.93□□□□□ -1.62
GFRA1P56159 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
GFRA1P56159 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
GFRA1P56159 RNU6-432P-201ENST00000384196 109 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 Y_RNA.460-201ENST00000384255 102 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 SNORA16A-201ENST00000384342 137 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 Y_RNA.493-201ENST00000384422 102 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 RNU1-77P-201ENST00000390868 162 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 RNU6-821P-201ENST00000390995 107 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 RNU6-510P-201ENST00000391239 108 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC005522.1-201ENST00000395416 346 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 RNU6-516P-201ENST00000411381 104 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.93□□□□□ -1.62
GFRA1P56159 MTCYBP8-201ENST00000422855 651 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 SRSF1P1-201ENST00000424058 520 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 SRIP2-201ENST00000428470 166 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC092162.1-201ENST00000432828 434 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.93□□□□□ -1.62
GFRA1P56159 NPM1P18-201ENST00000434232 732 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 LINC02210-201ENST00000444561 288 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA1P56159 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.93□□□□□ -1.62
GFRA1P56159 RN7SL188P-201ENST00000469842 285 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 OR2AO1P-201ENST00000476497 403 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC126389.1-201ENST00000477436 290 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 RN7SL629P-201ENST00000489622 285 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.93□□□□□ -1.62
GFRA1P56159 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA1P56159 HMGB1P41-201ENST00000520234 440 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 HMGN1P28-201ENST00000521340 364 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 AC023050.3-201ENST00000541142 333 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC006206.1-201ENST00000544842 3387 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 BNIP3P6-201ENST00000549284 499 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC128657.1-201ENST00000549459 145 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC126177.5-201ENST00000549599 178 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC087477.6-201ENST00000559595 843 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC243960.4-201ENST00000600532 288 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 uc_338.5-201ENST00000611839 155 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 SAMMSON-227ENST00000642114 1199 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GFRA1P56159 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA1P56159 AL138820.1-201ENST00000617901 5305 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.93□□□□□ -1.62
GFRA1P56159 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA1P56159 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
GFRA1P56159 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 MIR133B-201ENST00000362210 119 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RNU6-511P-201ENST00000363496 107 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RNA5SP339-201ENST00000390987 122 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 MIR1286-201ENST00000408112 78 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RNU2-39P-201ENST00000410604 198 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 OR1AA1P-201ENST00000419597 916 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA1P56159 MTCO3P46-201ENST00000425787 232 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AL138785.1-201ENST00000425821 331 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 OR2AS1P-201ENST00000427827 319 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 CYCSP6-201ENST00000434498 302 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.92□□□□□ -1.62
GFRA1P56159 RPL5P25-201ENST00000441148 775 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 TPT1P13-201ENST00000449760 499 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 CBX1P2-201ENST00000453841 458 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RPL36AP13-201ENST00000457490 317 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RNU7-182P-201ENST00000459009 62 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 RN7SL447P-201ENST00000494711 245 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 AC024558.1-201ENST00000505008 528 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC116562.3-201ENST00000506136 177 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RNU4-29P-201ENST00000515943 174 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 SCARNA16.4-201ENST00000516956 187 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 RN7SKP234-201ENST00000517173 224 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC068587.5-201ENST00000528506 175 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AP003385.6-201ENST00000531603 374 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 OR8L1P-201ENST00000534005 955 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC087241.2-201ENST00000535801 324 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC127381.1-201ENST00000555979 939 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms