Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC000123.3-201ENST00000624029 4975 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 MAPK10-286ENST00000641208 8747 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 RNU6-263P-201ENST00000363811 107 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 RNU6-837P-201ENST00000391056 108 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AL109941.1-201ENST00000401925 229 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 RNU4-78P-201ENST00000410940 126 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 RN7SKP33-201ENST00000410942 340 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AF274854.1-201ENST00000413236 615 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 AC004690.1-201ENST00000418216 328 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 OR2AM1P-201ENST00000422137 422 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 AL353777.1-201ENST00000425552 326 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 RPS17P8-201ENST00000434525 335 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 RABEPKP1-201ENST00000440529 1026 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.41□□□□□ -1.7
SUMO3P55854 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 MTND1P9-201ENST00000453775 944 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.41□□□□□ -1.7
SUMO3P55854 AC104308.1-201ENST00000454621 333 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AURKAPS2-201ENST00000454983 333 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 RPS5P7-201ENST00000456664 608 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 RPL23AP56-201ENST00000460778 453 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC020890.1-201ENST00000491837 504 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 RPL37P25-201ENST00000507308 276 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 HMGB3P16-201ENST00000508037 287 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.41□□□□□ -1.7
SUMO3P55854 RNU1-6P-201ENST00000516290 144 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.41□□□□□ -1.7
SUMO3P55854 AC021006.3-201ENST00000530771 192 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.41□□□□□ -1.7
SUMO3P55854 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.41□□□□□ -1.7
SUMO3P55854 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.41□□□□□ -1.7
SUMO3P55854 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AL590099.1-201ENST00000615276 138 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC009159.1-201ENST00000618386 642 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 AC002550.2-201ENST00000621246 394 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.41□□□□□ -1.7
SUMO3P55854 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SUMO3P55854 AC095050.2-201ENST00000510748 1458 ntBASIC4.41□□□□□ -1.7
SUMO3P55854 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SUMO3P55854 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.41□□□□□ -1.7
SUMO3P55854 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
SUMO3P55854 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
SUMO3P55854 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SUMO3P55854 FARSBP1-201ENST00000435808 1778 ntBASIC4.4□□□□□ -1.7
SUMO3P55854 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.7
SUMO3P55854 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.4□□□□□ -1.7
SUMO3P55854 AC009902.3-201ENST00000606235 2172 ntBASIC4.4□□□□□ -1.7
SUMO3P55854 AC011460.1-201ENST00000636268 1834 ntBASIC4.4□□□□□ -1.7
SUMO3P55854 AP001273.1-201ENST00000624493 3152 ntBASIC4.4□□□□□ -1.7
SUMO3P55854 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SUMO3P55854 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SUMO3P55854 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SUMO3P55854 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.4□□□□□ -1.71
SUMO3P55854 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SUMO3P55854 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 RNU5A-6P-201ENST00000384136 116 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 Y_RNA.582-201ENST00000391023 95 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.4□□□□□ -1.71
SUMO3P55854 RN7SKP235-201ENST00000410662 305 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC078974.1-201ENST00000411597 223 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.4□□□□□ -1.71
SUMO3P55854 AL391219.1-201ENST00000422570 483 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 CKS1BP6-201ENST00000424932 240 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 USP9YP28-201ENST00000435142 589 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC073614.1-201ENST00000438690 650 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.4□□□□□ -1.71
SUMO3P55854 GAPDHP17-201ENST00000449858 1001 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
SUMO3P55854 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.4□□□□□ -1.71
SUMO3P55854 snoU13.20-201ENST00000459180 104 ntBASIC4.4□□□□□ -1.71
SUMO3P55854 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SUMO3P55854 AC138853.1-201ENST00000503549 823 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms