Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 OR8B1P-202ENST00000641132 1178 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
NR1H2P55055 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.27□□□□□ -1.73
NR1H2P55055 AC116096.1-201ENST00000566804 2314 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AL031985.3-201ENST00000565390 2449 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 AC079741.1-201ENST00000321498 212 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 RNA5SP258-201ENST00000362750 119 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RNU6-1249P-201ENST00000363237 111 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 SNORA4.1-201ENST00000364263 144 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RNU4-40P-201ENST00000364351 143 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 RNU6-1200P-201ENST00000384162 107 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RNU6-1181P-201ENST00000384191 106 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RNU5A-2P-201ENST00000384337 116 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RNA5SP332-201ENST00000391063 115 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 ATP5F1P4-201ENST00000397288 746 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AL031679.1-201ENST00000400616 525 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RPS3AP23-201ENST00000401762 784 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AL356967.1-201ENST00000406305 431 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1H2P55055 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1H2P55055 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1H2P55055 AL035407.1-201ENST00000429211 571 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 TXNL1P1-201ENST00000429528 554 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 NRBF2P3-201ENST00000432731 865 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AL359265.2-201ENST00000434367 631 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 RPS17P8-201ENST00000434525 335 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 Z95327.1-201ENST00000446082 482 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H2P55055 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1H2P55055 RPS5P7-201ENST00000456664 608 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AC079804.1-201ENST00000461922 436 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 ST13P14-201ENST00000474095 734 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AC068587.1-201ENST00000483613 781 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H2P55055 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H2P55055 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1H2P55055 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1H2P55055 AC087373.1-201ENST00000524920 491 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AP004371.1-201ENST00000525240 214 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 AC091515.1-201ENST00000548110 679 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H2P55055 AC093249.4-201ENST00000564755 259 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AC006270.2-201ENST00000578523 652 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 VN1R92P-201ENST00000598511 928 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 Z99497.2-201ENST00000603634 310 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AC114878.2-201ENST00000604863 1251 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 AC011816.2-201ENST00000607089 556 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 MIR3974-201ENST00000637126 96 ntBASIC4.26□□□□□ -1.73
NR1H2P55055 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NR1H2P55055 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
NR1H2P55055 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H2P55055 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H2P55055 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H2P55055 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NR1H2P55055 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NR1H2P55055 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 AL583834.1-201ENST00000406943 343 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 TPMTP2-201ENST00000414372 726 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.25□□□□□ -1.73
NR1H2P55055 AL365203.2-201ENST00000423444 196 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 PRELID3BP10-201ENST00000431957 584 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AL591503.2-201ENST00000442314 1005 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
NR1H2P55055 MTCYBP3-201ENST00000445588 1137 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AL606662.1-201ENST00000445763 553 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 RPL23AP35-201ENST00000451906 501 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AL445669.2-201ENST00000454425 421 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC026979.1-201ENST00000492525 396 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms