Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL158196.1-201ENST00000616786 434 ntBASIC4.6□□□□□ -1.67
COPB1P53618 MIR7703-201ENST00000620784 77 ntBASIC4.6□□□□□ -1.67
COPB1P53618 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.6□□□□□ -1.67
COPB1P53618 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COPB1P53618 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COPB1P53618 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COPB1P53618 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COPB1P53618 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 RNU6-251P-201ENST00000363235 104 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RNU6-216P-201ENST00000363282 104 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RNU6-115P-201ENST00000364310 107 ntBASIC4.59□□□□□ -1.67
COPB1P53618 MIR129-1-201ENST00000384972 72 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RPL23AP29-201ENST00000397284 453 ntBASIC4.59□□□□□ -1.67
COPB1P53618 SNORA3C-201ENST00000408792 125 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RNA5SP36-201ENST00000410197 133 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RN7SKP235-201ENST00000410662 305 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AL663109.1-201ENST00000411498 844 ntBASIC4.59□□□□□ -1.67
COPB1P53618 MTCYBP38-201ENST00000417160 1123 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.59□□□□□ -1.67
COPB1P53618 EIF2AP4-201ENST00000424793 1781 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.59□□□□□ -1.67
COPB1P53618 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 AC241584.1-201ENST00000438469 1241 ntBASIC4.59□□□□□ -1.67
COPB1P53618 ACTR3P2-201ENST00000439585 1257 ntBASIC4.59□□□□□ -1.67
COPB1P53618 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.59□□□□□ -1.67
COPB1P53618 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.59□□□□□ -1.67
COPB1P53618 PHBP16-201ENST00000446318 950 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RPL36AP33-201ENST00000450395 310 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC022431.1-201ENST00000450941 438 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 RPL18AP17-201ENST00000455326 198 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.59□□□□□ -1.67
COPB1P53618 RNU6-1218P-201ENST00000458990 108 ntBASIC4.59□□□□□ -1.67
COPB1P53618 RN7SL98P-201ENST00000462271 300 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.59□□□□□ -1.67
COPB1P53618 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 AC116337.2-201ENST00000477662 156 ntBASIC4.59□□□□□ -1.67
COPB1P53618 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.59□□□□□ -1.67
COPB1P53618 AC108078.3-201ENST00000502633 489 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC006499.5-201ENST00000505037 514 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC025674.1-201ENST00000507074 324 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AF213884.2-201ENST00000510417 903 ntBASIC4.59□□□□□ -1.67
COPB1P53618 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COPB1P53618 RNU6-720P-201ENST00000516363 108 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.59□□□□□ -1.67
COPB1P53618 TRAV8-5-201ENST00000537369 341 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC092079.1-201ENST00000558620 1985 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC068714.1-201ENST00000559623 800 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
COPB1P53618 AL512347.1-201ENST00000566420 503 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.59□□□□□ -1.67
COPB1P53618 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.59□□□□□ -1.67
COPB1P53618 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.59□□□□□ -1.67
COPB1P53618 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COPB1P53618 AL136363.2-201ENST00000604173 851 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AL139286.2-201ENST00000606838 396 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC005332.10-201ENST00000612725 619 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC083809.1-201ENST00000615051 472 ntBASIC4.59□□□□□ -1.67
COPB1P53618 AC092650.2-201ENST00000619984 902 ntBASIC4.59□□□□□ -1.67
COPB1P53618 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.59□□□□□ -1.67
COPB1P53618 AC006927.3-201ENST00000638789 384 ntBASIC4.59□□□□□ -1.67
COPB1P53618 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COPB1P53618 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
COPB1P53618 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
COPB1P53618 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COPB1P53618 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPB1P53618 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPB1P53618 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPB1P53618 AC025031.4-201ENST00000621248 3271 ntBASIC4.58□□□□□ -1.68
COPB1P53618 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPB1P53618 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.58□□□□□ -1.68
COPB1P53618 RNU1-14P-201ENST00000362759 152 ntBASIC4.58□□□□□ -1.68
COPB1P53618 RNU6-660P-201ENST00000364566 109 ntBASIC4.58□□□□□ -1.68
COPB1P53618 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPB1P53618 RNU2-16P-201ENST00000410712 136 ntBASIC4.58□□□□□ -1.68
COPB1P53618 USP9YP33-201ENST00000412220 421 ntBASIC4.58□□□□□ -1.68
COPB1P53618 PGBD4P8-201ENST00000412993 562 ntBASIC4.58□□□□□ -1.68
COPB1P53618 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.58□□□□□ -1.68
COPB1P53618 CDK8P2-201ENST00000415020 547 ntBASIC4.58□□□□□ -1.68
COPB1P53618 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.58□□□□□ -1.68
COPB1P53618 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.58□□□□□ -1.68
COPB1P53618 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.58□□□□□ -1.68
COPB1P53618 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.58□□□□□ -1.68
COPB1P53618 RPS26P40-201ENST00000435209 294 ntBASIC4.58□□□□□ -1.68
COPB1P53618 USP9YP35-201ENST00000435696 412 ntBASIC4.58□□□□□ -1.68
COPB1P53618 MTND2P20-201ENST00000440805 661 ntBASIC4.58□□□□□ -1.68
COPB1P53618 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.58□□□□□ -1.68
COPB1P53618 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.58□□□□□ -1.68
COPB1P53618 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.58□□□□□ -1.68
COPB1P53618 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms