Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL157700.1-201ENST00000561973 1432 ntBASIC4.68□□□□□ -1.66
NEK3P51956 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEK3P51956 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.68□□□□□ -1.66
NEK3P51956 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEK3P51956 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEK3P51956 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEK3P51956 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NEK3P51956 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEK3P51956 SNORA7.2-201ENST00000364446 145 ntBASIC4.67□□□□□ -1.66
NEK3P51956 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEK3P51956 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NEK3P51956 AL031577.2-201ENST00000404133 280 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AL121834.1-202ENST00000404494 277 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 MTCO3P12-201ENST00000416718 547 ntBASIC4.67□□□□□ -1.66
NEK3P51956 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 AL390023.1-201ENST00000428836 262 ntBASIC4.67□□□□□ -1.66
NEK3P51956 RPL23AP1-201ENST00000428990 471 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AL512649.1-201ENST00000428997 581 ntBASIC4.67□□□□□ -1.66
NEK3P51956 RPL21P91-201ENST00000429231 479 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 MTND4LP10-201ENST00000435146 291 ntBASIC4.67□□□□□ -1.66
NEK3P51956 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 AL445567.1-201ENST00000439121 144 ntBASIC4.67□□□□□ -1.66
NEK3P51956 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.67□□□□□ -1.66
NEK3P51956 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.67□□□□□ -1.66
NEK3P51956 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 AC053481.1-201ENST00000467217 306 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AC021678.1-201ENST00000505195 936 ntBASIC4.67□□□□□ -1.66
NEK3P51956 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.67□□□□□ -1.66
NEK3P51956 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 AC090151.1-201ENST00000520784 730 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
NEK3P51956 AP001781.1-201ENST00000530977 207 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AL121603.1-201ENST00000553815 142 ntBASIC4.67□□□□□ -1.66
NEK3P51956 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.67□□□□□ -1.66
NEK3P51956 AC141257.3-201ENST00000572906 215 ntBASIC4.67□□□□□ -1.66
NEK3P51956 MIR4715-201ENST00000584117 79 ntBASIC4.67□□□□□ -1.66
NEK3P51956 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.67□□□□□ -1.66
NEK3P51956 AC121247.2-201ENST00000604776 136 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AC004853.1-201ENST00000604902 698 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AC022079.1-201ENST00000621546 602 ntBASIC4.67□□□□□ -1.66
NEK3P51956 AL356585.4-201ENST00000623078 1229 ntBASIC4.67□□□□□ -1.66
NEK3P51956 FP325313.1-201ENST00000638228 703 ntBASIC4.67□□□□□ -1.66
NEK3P51956 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEK3P51956 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEK3P51956 AC116096.1-201ENST00000566804 2314 ntBASIC4.67□□□□□ -1.66
NEK3P51956 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 AC010300.1-201ENST00000600671 5134 ntBASIC4.66□□□□□ -1.66
NEK3P51956 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 OR56B2P-202ENST00000641377 2453 ntBASIC4.66□□□□□ -1.66
NEK3P51956 OR14L1P-202ENST00000641545 3009 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC006971.1-201ENST00000407916 4486 ntBASIC4.66□□□□□ -1.66
NEK3P51956 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 XIAPP3-201ENST00000312918 795 ntBASIC4.66□□□□□ -1.66
NEK3P51956 RNU6-343P-201ENST00000364709 104 ntBASIC4.66□□□□□ -1.66
NEK3P51956 RNA5SP167-201ENST00000365461 116 ntBASIC4.66□□□□□ -1.66
NEK3P51956 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.66□□□□□ -1.66
NEK3P51956 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.66□□□□□ -1.66
NEK3P51956 AL160275.2-201ENST00000412010 394 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC127526.1-201ENST00000417526 366 ntBASIC4.66□□□□□ -1.66
NEK3P51956 OR1AA1P-201ENST00000419597 916 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 UBE2V1P3-201ENST00000439651 417 ntBASIC4.66□□□□□ -1.66
NEK3P51956 Z83846.1-201ENST00000446798 265 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 AL353691.1-201ENST00000451332 387 ntBASIC4.66□□□□□ -1.66
NEK3P51956 MTND2P28-201ENST00000457540 1044 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC017015.1-201ENST00000477387 286 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AP000926.1-201ENST00000479573 241 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC108022.1-201ENST00000493466 478 ntBASIC4.66□□□□□ -1.66
NEK3P51956 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.66□□□□□ -1.66
NEK3P51956 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.66□□□□□ -1.66
NEK3P51956 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.66□□□□□ -1.66
NEK3P51956 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.66□□□□□ -1.66
NEK3P51956 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 AC100770.1-201ENST00000532310 322 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.66□□□□□ -1.66
NEK3P51956 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 SNORD84-203ENST00000584275 78 ntBASIC4.66□□□□□ -1.66
NEK3P51956 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 RPL12P25-202ENST00000598100 674 ntBASIC4.66□□□□□ -1.66
NEK3P51956 MIR6798-201ENST00000612887 67 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms