Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MTCO3P35-201ENST00000485582 781 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 OR5H3P-201ENST00000502817 919 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC110768.1-201ENST00000509222 400 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 TXNP6-201ENST00000510190 310 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.09□□□□□ -1.91
CX3CR1P49238 PRELID3BP4-201ENST00000515476 571 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.09□□□□□ -1.91
CX3CR1P49238 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AP003168.1-201ENST00000530091 307 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC010198.2-201ENST00000550612 259 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 MIR3186-201ENST00000577404 85 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 BPTFP1-201ENST00000579209 492 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 RN7SL622P-201ENST00000585292 275 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 VN1R85P-201ENST00000601587 426 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AL451086.1-201ENST00000605596 223 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AL162574.2-201ENST00000614618 657 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC068722.2-201ENST00000618734 544 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AL672296.1-201ENST00000427780 2158 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CX3CR1P49238 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.09□□□□□ -1.92
CX3CR1P49238 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CX3CR1P49238 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CX3CR1P49238 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.09□□□□□ -1.92
CX3CR1P49238 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC024341.1-201ENST00000526444 1552 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC007823.1-201ENST00000569932 1566 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CX3CR1P49238 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CX3CR1P49238 RNA5SP258-201ENST00000362750 119 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 RNU6-989P-201ENST00000362756 107 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 RNA5SP51-201ENST00000364750 119 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AP002088.1-201ENST00000382740 395 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 RNU6-761P-201ENST00000384148 107 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 RNU6-921P-201ENST00000384361 107 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CX3CR1P49238 RN7SKP53-201ENST00000411337 315 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CR1P49238 ATP5A1P2-201ENST00000412323 255 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 OR51A3P-201ENST00000413596 924 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CR1P49238 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CR1P49238 BX679664.1-201ENST00000434429 253 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 SETP5-201ENST00000437270 562 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 HSFY3P-201ENST00000444242 1191 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AL096803.2-201ENST00000450032 677 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CR1P49238 SLC31A1P1-201ENST00000451221 567 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 GTF2IP12-201ENST00000456547 356 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC103987.1-201ENST00000473394 348 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AL136126.1-201ENST00000473603 402 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AP000563.1-201ENST00000490865 758 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 SETP14-201ENST00000497538 873 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC011352.3-201ENST00000505162 593 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC079148.1-201ENST00000565944 819 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CR1P49238 MIR3160-1-201ENST00000577972 85 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 MIR4697-201ENST00000582977 78 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC005776.1-201ENST00000603164 290 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AL512506.1-201ENST00000613918 449 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC105227.2-201ENST00000615075 605 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AL356094.1-201ENST00000624663 1212 ntBASIC3.08□□□□□ -1.92
CX3CR1P49238 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms