Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSR1P43307 AC109583.1-201ENST00000432156 268 ntBASIC3.68□□□□□ -1.82
SSR1P43307 UBE2V1P5-201ENST00000440070 405 ntBASIC3.68□□□□□ -1.82
SSR1P43307 COX6CP2-201ENST00000444980 225 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AL357552.1-201ENST00000445254 415 ntBASIC3.68□□□□□ -1.82
SSR1P43307 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSR1P43307 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.68□□□□□ -1.82
SSR1P43307 MRPS31P2-201ENST00000451581 518 ntBASIC3.68□□□□□ -1.82
SSR1P43307 DNAJC19P8-201ENST00000452887 259 ntBASIC3.68□□□□□ -1.82
SSR1P43307 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.68□□□□□ -1.82
SSR1P43307 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.68□□□□□ -1.82
SSR1P43307 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AC104689.1-201ENST00000473356 768 ntBASIC3.68□□□□□ -1.82
SSR1P43307 OR52A4P-202ENST00000481634 799 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AC126121.1-201ENST00000482313 553 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AP000563.1-201ENST00000490865 758 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AL024509.2-201ENST00000493462 493 ntBASIC3.68□□□□□ -1.82
SSR1P43307 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.68□□□□□ -1.82
SSR1P43307 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.68□□□□□ -1.82
SSR1P43307 HIGD1AP3-201ENST00000515857 278 ntBASIC3.68□□□□□ -1.82
SSR1P43307 SNORA70.19-201ENST00000516717 90 ntBASIC3.68□□□□□ -1.82
SSR1P43307 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.68□□□□□ -1.82
SSR1P43307 AC026616.1-201ENST00000523157 525 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AC109635.4-202ENST00000531666 412 ntBASIC3.68□□□□□ -1.82
SSR1P43307 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.68□□□□□ -1.82
SSR1P43307 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.68□□□□□ -1.82
SSR1P43307 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.68□□□□□ -1.82
SSR1P43307 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.68□□□□□ -1.82
SSR1P43307 AC006116.10-201ENST00000591836 581 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AC008687.2-201ENST00000597865 520 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AL451086.1-201ENST00000605596 223 ntBASIC3.68□□□□□ -1.82
SSR1P43307 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.68□□□□□ -1.82
SSR1P43307 AC091046.2-201ENST00000620775 665 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AL163152.1-201ENST00000642001 374 ntBASIC3.68□□□□□ -1.82
SSR1P43307 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.68□□□□□ -1.82
SSR1P43307 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSR1P43307 AC022031.1-201ENST00000585985 2593 ntBASIC3.67□□□□□ -1.82
SSR1P43307 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSR1P43307 RNU6-50P-201ENST00000362356 103 ntBASIC3.67□□□□□ -1.82
SSR1P43307 UBE2V1P15-201ENST00000407776 448 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AL445183.3-201ENST00000414168 502 ntBASIC3.67□□□□□ -1.82
SSR1P43307 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.67□□□□□ -1.82
SSR1P43307 AL445584.1-201ENST00000431451 330 ntBASIC3.67□□□□□ -1.82
SSR1P43307 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 RPL23AP22-201ENST00000437556 453 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC004865.1-201ENST00000442276 1003 ntBASIC3.67□□□□□ -1.82
SSR1P43307 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
SSR1P43307 AC104472.2-201ENST00000469035 601 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.67□□□□□ -1.82
SSR1P43307 ACTR3P3-201ENST00000480448 893 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC016065.2-201ENST00000514530 444 ntBASIC3.67□□□□□ -1.82
SSR1P43307 RN7SKP18-201ENST00000516005 275 ntBASIC3.67□□□□□ -1.82
SSR1P43307 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC083923.1-201ENST00000523708 376 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.67□□□□□ -1.82
SSR1P43307 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSR1P43307 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.67□□□□□ -1.82
SSR1P43307 AP003717.3-201ENST00000544832 1180 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.67□□□□□ -1.82
SSR1P43307 AC096947.1-201ENST00000603233 470 ntBASIC3.67□□□□□ -1.82
SSR1P43307 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC079610.2-201ENST00000604818 690 ntBASIC3.67□□□□□ -1.82
SSR1P43307 AC008264.2-201ENST00000610193 3731 ntBASIC3.67□□□□□ -1.82
SSR1P43307 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.67□□□□□ -1.82
SSR1P43307 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSR1P43307 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSR1P43307 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSR1P43307 RNU6-1181P-201ENST00000384191 106 ntBASIC3.66□□□□□ -1.82
SSR1P43307 SNORA57.1-201ENST00000391227 145 ntBASIC3.66□□□□□ -1.82
SSR1P43307 SKINT1L-201ENST00000401057 817 ntBASIC3.66□□□□□ -1.82
SSR1P43307 RNA5SP344-201ENST00000411081 104 ntBASIC3.66□□□□□ -1.82
SSR1P43307 CYCSP19-201ENST00000411715 316 ntBASIC3.66□□□□□ -1.82
SSR1P43307 HMGB3P31-201ENST00000413333 595 ntBASIC3.66□□□□□ -1.82
SSR1P43307 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 AL158825.1-201ENST00000414735 521 ntBASIC3.66□□□□□ -1.82
SSR1P43307 AL513174.1-201ENST00000423182 629 ntBASIC3.66□□□□□ -1.82
SSR1P43307 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.66□□□□□ -1.82
SSR1P43307 FAR1P1-201ENST00000427163 934 ntBASIC3.66□□□□□ -1.82
SSR1P43307 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.66□□□□□ -1.82
SSR1P43307 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.66□□□□□ -1.82
SSR1P43307 RNFT1P2-201ENST00000443064 757 ntBASIC3.66□□□□□ -1.82
SSR1P43307 NOTCH2P1-201ENST00000443481 624 ntBASIC3.66□□□□□ -1.82
SSR1P43307 RN7SL594P-201ENST00000470590 287 ntBASIC3.66□□□□□ -1.82
SSR1P43307 KCTD9P5-201ENST00000504141 1170 ntBASIC3.66□□□□□ -1.82
SSR1P43307 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.66□□□□□ -1.82
SSR1P43307 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.66□□□□□ -1.82
SSR1P43307 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.66□□□□□ -1.82
SSR1P43307 MED28P5-201ENST00000528254 438 ntBASIC3.66□□□□□ -1.82
SSR1P43307 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.66□□□□□ -1.82
SSR1P43307 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.66□□□□□ -1.82
SSR1P43307 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms