Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU4-78P-201ENST00000410940 126 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AC012065.2-201ENST00000421295 375 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXD13P35453 AC084290.1-201ENST00000434995 374 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 RPL23AP76-201ENST00000441860 458 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD13P35453 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXD13P35453 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXD13P35453 AC084198.1-201ENST00000477747 402 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 NCOR1P1-202ENST00000486162 291 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 AC005921.1-201ENST00000510589 286 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXD13P35453 AC026412.2-201ENST00000512270 1075 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AC109445.1-201ENST00000512356 383 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD13P35453 RNA5SP208-201ENST00000516156 78 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 RN7SKP31-201ENST00000516354 278 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
HOXD13P35453 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD13P35453 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXD13P35453 HIGD1AP17-201ENST00000554576 276 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 MIR3160-1-201ENST00000577972 85 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 MIR4697-201ENST00000582977 78 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AP003392.5-201ENST00000607857 415 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AC069209.1-201ENST00000619282 651 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HOXD13P35453 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HOXD13P35453 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD13P35453 AC008725.1-201ENST00000605123 2263 ntBASIC4.24□□□□□ -1.73
HOXD13P35453 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXD13P35453 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HOXD13P35453 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD13P35453 AL157700.1-201ENST00000561973 1432 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 MTCO1P23-201ENST00000415223 1526 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 RNU6-335P-201ENST00000364563 113 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 RNA5SP189-201ENST00000364920 115 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HOXD13P35453 RNU6-878P-201ENST00000384578 110 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 TAF9BP1-201ENST00000396646 746 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AIMP1P1-201ENST00000418670 937 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC006548.1-201ENST00000427470 102 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AL050321.1-201ENST00000432363 400 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 RPL21P112-201ENST00000434403 463 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD13P35453 AL356535.1-201ENST00000440335 398 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 MTND2P20-201ENST00000440805 661 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD13P35453 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD13P35453 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD13P35453 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD13P35453 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 OR9M1P-201ENST00000459641 921 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD13P35453 AC078918.1-201ENST00000498515 228 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD13P35453 RAC1P2-201ENST00000511164 579 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD13P35453 SLC2A13P1-201ENST00000531560 322 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AP004242.1-201ENST00000533701 349 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 OR8R1P-201ENST00000543943 764 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD13P35453 AC023813.2-201ENST00000564321 469 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXD13P35453 AC012182.1-201ENST00000570133 895 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 SNRPGP15-201ENST00000600149 222 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC009220.3-201ENST00000604318 586 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AL139286.1-201ENST00000604465 483 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD13P35453 AC006329.2-201ENST00000611491 394 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AL050303.3-201ENST00000613704 284 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AL713922.2-201ENST00000619384 716 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD13P35453 FP236240.3-201ENST00000623061 327 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AL359715.5-201ENST00000623431 443 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 CR381572.1-201ENST00000625098 102 ntBASIC4.23□□□□□ -1.73
HOXD13P35453 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD13P35453 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD13P35453 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD13P35453 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXD13P35453 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXD13P35453 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXD13P35453 RNU6-263P-201ENST00000363811 107 ntBASIC4.22□□□□□ -1.73
HOXD13P35453 AL603766.1-201ENST00000407763 664 ntBASIC4.22□□□□□ -1.73
HOXD13P35453 RNA5SP80-201ENST00000410475 111 ntBASIC4.22□□□□□ -1.73
HOXD13P35453 AC092647.1-201ENST00000420654 287 ntBASIC4.22□□□□□ -1.73
HOXD13P35453 FNDC3CP-201ENST00000420795 1155 ntBASIC4.22□□□□□ -1.73
HOXD13P35453 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXD13P35453 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXD13P35453 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXD13P35453 RPL39P6-201ENST00000448289 150 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms