Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 Z95327.1-201ENST00000446082 482 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.04□□□□□ -1.6
HOXC12P31275 CACYBPP2-201ENST00000453625 678 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 OR2AO1P-201ENST00000476497 403 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 RN7SL570P-201ENST00000484405 292 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 RN7SL30P-201ENST00000488416 306 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 NDUFB5P1-201ENST00000508134 564 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 FTH1P21-201ENST00000512179 511 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC114797.1-201ENST00000514003 728 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 RNU6-615P-201ENST00000516065 106 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 RNU6-27P-201ENST00000516146 107 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 RNA5SP92-201ENST00000516437 110 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 SNORA43.3-201ENST00000517240 103 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 IGKV2D-36-201ENST00000518643 226 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 AL049872.1-201ENST00000556323 322 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 ANP32BP3-201ENST00000559213 706 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 RPL21P12-201ENST00000559810 515 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 MIR4795-201ENST00000584182 89 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC005224.3-201ENST00000584683 2140 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC010525.2-201ENST00000590920 195 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC006115.2-201ENST00000596823 202 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 NANOGP3-201ENST00000605855 286 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 AC006020.1-201ENST00000420179 1854 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 LINC01109-201ENST00000603837 3081 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 ZNF734P-201ENST00000419494 1534 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC12P31275 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXC12P31275 Y_RNA.255-201ENST00000364581 97 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 RNU6-996P-201ENST00000365438 107 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 MIR585-201ENST00000384887 94 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXC12P31275 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXC12P31275 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 AC007390.1-201ENST00000415722 356 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.03□□□□□ -1.6
HOXC12P31275 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 RPL36AP53-201ENST00000432891 316 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 RPS20P5-201ENST00000434808 360 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 RPS12P17-201ENST00000438591 377 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC12P31275 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 EEF1B2P6-201ENST00000445713 673 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 DDX3P2-201ENST00000446138 111 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 RPL32P33-201ENST00000487023 394 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC12P31275 AC021678.3-201ENST00000517893 476 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 AC022690.1-201ENST00000526681 550 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AC011979.2-201ENST00000527568 352 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 OR5B19P-201ENST00000531766 928 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 OR5AL2P-201ENST00000532185 920 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC12P31275 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC12P31275 AC105224.1-201ENST00000587055 421 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AL451044.1-201ENST00000604867 238 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC12P31275 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 DHX40P1-201ENST00000588725 1412 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 SAGE4P-201ENST00000442271 3381 ntBASIC5.03□□□□□ -1.6
HOXC12P31275 AC026523.2-201ENST00000625039 7739 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms