Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC138915.2-201ENST00000569776 97 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 AC234772.3-201ENST00000602277 528 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 AL009028.1-201ENST00000604895 802 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 SNORA51-201ENST00000606420 132 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 AP002791.1-201ENST00000623291 381 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 MIR4496-201ENST00000635896 61 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA13P31271 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXA13P31271 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA13P31271 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXA13P31271 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HOXA13P31271 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA13P31271 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.26□□□□□ -1.73
HOXA13P31271 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA13P31271 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA13P31271 SEPT7P7-201ENST00000420492 1301 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 AC090229.1-201ENST00000590983 1609 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 RNU4-92P-201ENST00000363783 136 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 SNORD116.1-201ENST00000365628 92 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 Y_RNA.465-201ENST00000384293 102 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 MIR649-201ENST00000384843 97 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 ERHP2-201ENST00000402323 299 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA13P31271 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 AL590084.1-201ENST00000407885 387 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC093578.1-201ENST00000415219 368 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC241584.1-201ENST00000438469 1241 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AL591719.1-201ENST00000444669 744 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 SNORD11.1-201ENST00000459482 85 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA13P31271 AP000893.1-201ENST00000474462 794 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 OR4G11P-201ENST00000492842 939 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXA13P31271 MTCO1P30-201ENST00000515244 580 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 RN7SKP234-201ENST00000517173 224 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA13P31271 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA13P31271 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 MTND4P33-201ENST00000556706 766 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 BNIP3P33-201ENST00000598912 569 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 AC113368.1-201ENST00000603736 382 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA13P31271 AP003117.2-201ENST00000606010 545 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA13P31271 OR6R2P-201ENST00000609216 300 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXA13P31271 AC009093.8-201ENST00000641769 292 ntBASIC4.25□□□□□ -1.73
HOXA13P31271 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA13P31271 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA13P31271 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA13P31271 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA13P31271 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA13P31271 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA13P31271 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA13P31271 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXA13P31271 RNU5D-1-201ENST00000363299 116 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 RNU6-1226P-201ENST00000384317 107 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 MIR153-1-201ENST00000384914 90 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 MIR513B-201ENST00000385136 84 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 RNA5SP424-201ENST00000390988 115 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 TAF9BP1-201ENST00000396646 746 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 RNU2-28P-201ENST00000410457 189 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 JKAMPP1-201ENST00000413804 919 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC092634.6-201ENST00000418558 192 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 KRR1P1-201ENST00000419430 803 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC084290.1-201ENST00000434995 374 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA13P31271 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 RPL7P15-201ENST00000461190 712 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 AC008837.2-201ENST00000513076 418 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 RNU6-1225P-201ENST00000516336 65 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA13P31271 ARL2BPP5-201ENST00000523141 481 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA13P31271 DEFB109D-201ENST00000529497 240 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms