Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.21□□□□□ -1.73
CLIP1P30622 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLIP1P30622 ELF2P3-201ENST00000445099 1506 ntBASIC4.21□□□□□ -1.74
CLIP1P30622 AC008264.2-201ENST00000610193 3731 ntBASIC4.21□□□□□ -1.74
CLIP1P30622 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP1P30622 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLIP1P30622 RNA5SP68-201ENST00000363885 119 ntBASIC4.21□□□□□ -1.74
CLIP1P30622 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.21□□□□□ -1.74
CLIP1P30622 MTCYBP19-201ENST00000517463 1124 ntBASIC4.21□□□□□ -1.74
CLIP1P30622 AC109329.2-201ENST00000519658 482 ntBASIC4.21□□□□□ -1.74
CLIP1P30622 AP001207.1-201ENST00000524051 481 ntBASIC4.21□□□□□ -1.74
CLIP1P30622 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP1P30622 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP1P30622 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLIP1P30622 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CLIP1P30622 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.2□□□□□ -1.74
CLIP1P30622 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP1P30622 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP1P30622 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.2□□□□□ -1.74
CLIP1P30622 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP1P30622 AC096725.1-201ENST00000514266 313 ntBASIC4.2□□□□□ -1.74
CLIP1P30622 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP1P30622 AP001646.1-201ENST00000527936 915 ntBASIC4.2□□□□□ -1.74
CLIP1P30622 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.2□□□□□ -1.74
CLIP1P30622 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.2□□□□□ -1.74
CLIP1P30622 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.2□□□□□ -1.74
CLIP1P30622 ATP5F1P7-201ENST00000567330 760 ntBASIC4.2□□□□□ -1.74
CLIP1P30622 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.2□□□□□ -1.74
CLIP1P30622 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP1P30622 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP1P30622 AC090229.1-201ENST00000590983 1609 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP1P30622 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP1P30622 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP1P30622 MIR518C-201ENST00000384822 101 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 AL159169.1-201ENST00000421119 127 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP1P30622 RPS6P12-201ENST00000432491 726 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP1P30622 AC107015.1-201ENST00000466902 747 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP1P30622 RNA5SP320-201ENST00000516263 124 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 RNA5SP148-201ENST00000516527 94 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 AC100870.1-201ENST00000522035 505 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 RFPL1S-203ENST00000539579 330 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.19□□□□□ -1.74
CLIP1P30622 AC087241.4-201ENST00000612441 480 ntBASIC4.19□□□□□ -1.74
CLIP1P30622 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP1P30622 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP1P30622 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP1P30622 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP1P30622 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLIP1P30622 SNORA70B-201ENST00000384210 135 ntBASIC4.18□□□□□ -1.74
CLIP1P30622 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLIP1P30622 TRBV12-1-201ENST00000479785 344 ntBASIC4.18□□□□□ -1.74
CLIP1P30622 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.18□□□□□ -1.74
CLIP1P30622 AC005351.1-201ENST00000511152 786 ntBASIC4.18□□□□□ -1.74
CLIP1P30622 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP1P30622 SNORD62.1-201ENST00000362541 86 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 MIR137-201ENST00000385223 102 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 AL512633.1-201ENST00000399931 655 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.17□□□□□ -1.74
CLIP1P30622 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP1P30622 AL162388.1-201ENST00000450912 352 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 AL590639.1-201ENST00000456484 337 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.17□□□□□ -1.74
CLIP1P30622 AC147055.1-201ENST00000509261 750 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 RNA5SP24-201ENST00000516478 95 ntBASIC4.17□□□□□ -1.74
CLIP1P30622 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.17□□□□□ -1.74
CLIP1P30622 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.17□□□□□ -1.74
CLIP1P30622 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLIP1P30622 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP1P30622 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP1P30622 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP1P30622 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP1P30622 OR5AK3P-201ENST00000527486 1297 ntBASIC4.16□□□□□ -1.74
CLIP1P30622 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP1P30622 OR8L1P-201ENST00000534005 955 ntBASIC4.16□□□□□ -1.74
CLIP1P30622 AC012119.1-201ENST00000603184 222 ntBASIC4.16□□□□□ -1.74
CLIP1P30622 AP006248.2-201ENST00000623309 592 ntBASIC4.16□□□□□ -1.74
CLIP1P30622 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CLIP1P30622 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CLIP1P30622 AC008725.1-201ENST00000605123 2263 ntBASIC4.16□□□□□ -1.74
CLIP1P30622 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP1P30622 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.15□□□□□ -1.74
CLIP1P30622 AC244505.4-201ENST00000434905 287 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.15□□□□□ -1.74
CLIP1P30622 SSXP5-201ENST00000443473 287 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 AL513124.1-201ENST00000450410 614 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 AC008549.1-201ENST00000512900 643 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 RNA5SP76-201ENST00000516277 87 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP1P30622 AC027176.1-201ENST00000560204 514 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 AGGF1P8-201ENST00000562979 1000 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 AC079089.3-201ENST00000603094 673 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 AC107871.2-201ENST00000612894 502 ntBASIC4.15□□□□□ -1.74
CLIP1P30622 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP1P30622 AC009487.2-201ENST00000420969 6821 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms