Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MTND4P34-201ENST00000572715 1371 ntBASIC2.82□□□□□ -1.96
ATF1P18846 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
ATF1P18846 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.82□□□□□ -1.96
ATF1P18846 AC118273.1-201ENST00000525324 3006 ntBASIC2.82□□□□□ -1.96
ATF1P18846 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.81□□□□□ -1.96
ATF1P18846 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.81□□□□□ -1.96
ATF1P18846 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATF1P18846 RNU6-543P-201ENST00000362576 108 ntBASIC2.81□□□□□ -1.96
ATF1P18846 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ATF1P18846 AC073264.1-201ENST00000411508 416 ntBASIC2.81□□□□□ -1.96
ATF1P18846 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 OR2B8P-201ENST00000432841 938 ntBASIC2.81□□□□□ -1.96
ATF1P18846 RPL21P110-201ENST00000433345 446 ntBASIC2.81□□□□□ -1.96
ATF1P18846 TRIM60P18-201ENST00000441518 828 ntBASIC2.81□□□□□ -1.96
ATF1P18846 SSXP4-201ENST00000451349 245 ntBASIC2.81□□□□□ -1.96
ATF1P18846 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATF1P18846 SYPL1P1-201ENST00000473622 768 ntBASIC2.81□□□□□ -1.96
ATF1P18846 AC093663.1-201ENST00000497190 394 ntBASIC2.81□□□□□ -1.96
ATF1P18846 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.81□□□□□ -1.96
ATF1P18846 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.81□□□□□ -1.96
ATF1P18846 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 HMGN1P15-201ENST00000513870 295 ntBASIC2.81□□□□□ -1.96
ATF1P18846 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATF1P18846 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 TRMT10BP1-201ENST00000519377 943 ntBASIC2.81□□□□□ -1.96
ATF1P18846 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 AC010306.1-201ENST00000523223 1117 ntBASIC2.81□□□□□ -1.96
ATF1P18846 AP004371.1-201ENST00000525240 214 ntBASIC2.81□□□□□ -1.96
ATF1P18846 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.81□□□□□ -1.96
ATF1P18846 OR5B10P-201ENST00000532869 642 ntBASIC2.81□□□□□ -1.96
ATF1P18846 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.81□□□□□ -1.96
ATF1P18846 OR4T1P-201ENST00000554933 911 ntBASIC2.81□□□□□ -1.96
ATF1P18846 MTCYBP28-201ENST00000566728 1132 ntBASIC2.81□□□□□ -1.96
ATF1P18846 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
ATF1P18846 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.81□□□□□ -1.96
ATF1P18846 AC005242.1-201ENST00000585658 438 ntBASIC2.81□□□□□ -1.96
ATF1P18846 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF1P18846 AL162713.1-201ENST00000604480 262 ntBASIC2.81□□□□□ -1.96
ATF1P18846 U73479.1-201ENST00000618062 168 ntBASIC2.81□□□□□ -1.96
ATF1P18846 AL392088.2-201ENST00000637607 285 ntBASIC2.81□□□□□ -1.96
ATF1P18846 SAGE4P-201ENST00000442271 3381 ntBASIC2.81□□□□□ -1.96
ATF1P18846 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 MAPK10-362ENST00000641864 4484 ntBASIC2.8□□□□□ -1.96
ATF1P18846 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.8□□□□□ -1.96
ATF1P18846 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 AC009501.3-201ENST00000605001 1352 ntBASIC2.8□□□□□ -1.96
ATF1P18846 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATF1P18846 RNU6-263P-201ENST00000363811 107 ntBASIC2.8□□□□□ -1.96
ATF1P18846 RNA5SP479-201ENST00000364858 117 ntBASIC2.8□□□□□ -1.96
ATF1P18846 EIF5P1-201ENST00000400019 1231 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AL445189.1-201ENST00000405722 338 ntBASIC2.8□□□□□ -1.96
ATF1P18846 RNU2-71P-201ENST00000411395 189 ntBASIC2.8□□□□□ -1.96
ATF1P18846 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.8□□□□□ -1.96
ATF1P18846 TRIAP1P1-201ENST00000427062 225 ntBASIC2.8□□□□□ -1.96
ATF1P18846 HIGD1AP11-201ENST00000438361 280 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC004865.1-201ENST00000442276 1003 ntBASIC2.8□□□□□ -1.96
ATF1P18846 RPS12P18-201ENST00000442381 270 ntBASIC2.8□□□□□ -1.96
ATF1P18846 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 RPL26P28-201ENST00000451325 435 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 RPL5P24-201ENST00000463742 885 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.8□□□□□ -1.96
ATF1P18846 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 RNA5SP385-201ENST00000515947 110 ntBASIC2.8□□□□□ -1.96
ATF1P18846 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.8□□□□□ -1.96
ATF1P18846 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.8□□□□□ -1.96
ATF1P18846 AP001207.1-201ENST00000524051 481 ntBASIC2.8□□□□□ -1.96
ATF1P18846 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.8□□□□□ -1.96
ATF1P18846 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AC107954.1-201ENST00000565906 727 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC106785.1-201ENST00000565935 262 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 MIR4276-201ENST00000584832 70 ntBASIC2.8□□□□□ -1.96
ATF1P18846 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
ATF1P18846 AC007566.2-201ENST00000603642 413 ntBASIC2.8□□□□□ -1.96
ATF1P18846 IGHV3-29-201ENST00000604817 344 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 AC006023.2-201ENST00000609916 167 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AL157817.1-201ENST00000614264 790 ntBASIC2.8□□□□□ -1.96
ATF1P18846 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
ATF1P18846 CR392039.5-201ENST00000623201 510 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC020923.1-201ENST00000624021 917 ntBASIC2.8□□□□□ -1.96
ATF1P18846 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ATF1P18846 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.8□□□□□ -1.96
ATF1P18846 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATF1P18846 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms