Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL6A2P12110 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL6A2P12110 RNU6-28P-201ENST00000362378 107 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 RN7SKP113-201ENST00000363891 295 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 Y_RNA.279-201ENST00000364763 95 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 AL356776.1-201ENST00000406574 447 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 MIR1182-201ENST00000408363 97 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 RN7SKP247-201ENST00000411094 308 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 RWDD4P2-201ENST00000426392 563 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 HMGB3P12-201ENST00000438745 556 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AP000281.1-201ENST00000444036 316 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC011005.3-201ENST00000491624 395 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 OR5H5P-201ENST00000503164 928 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 RPS4XP20-201ENST00000505751 772 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 HMGB3P16-201ENST00000508037 287 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC053481.3-201ENST00000577881 843 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 MIR3167-201ENST00000579623 85 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 RN7SL435P-201ENST00000584418 282 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC121334.2-201ENST00000605387 271 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 AL136295.6-201ENST00000610486 658 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC037198.3-201ENST00000616754 526 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC090527.3-201ENST00000619041 548 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC022106.2-201ENST00000620114 757 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC015871.5-202ENST00000623252 701 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 AL359697.1-201ENST00000624879 587 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 SAGE4P-201ENST00000442271 3381 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
COL6A2P12110 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL6A2P12110 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL6A2P12110 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 AC063976.2-201ENST00000425667 3556 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL6A2P12110 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL6A2P12110 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL6A2P12110 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.07□□□□□ -1.6
COL6A2P12110 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 AC092125.1-201ENST00000562568 1995 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 RNU5E-1-201ENST00000362477 120 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 SNORD56.2-201ENST00000363242 71 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 RNU6-1243P-201ENST00000364028 107 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 Y_RNA.263-201ENST00000364659 114 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 SNORA2.3-201ENST00000383920 135 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AC013442.1-201ENST00000397347 228 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AL359704.1-201ENST00000411586 781 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.06□□□□□ -1.6
COL6A2P12110 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.06□□□□□ -1.6
COL6A2P12110 AL353597.2-202ENST00000434901 373 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 HMGB3P9-201ENST00000441799 583 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 RPS20P32-201ENST00000456044 356 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 RN7SL717P-201ENST00000478343 297 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC093267.1-201ENST00000489176 961 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC114786.4-201ENST00000508771 728 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 LRRC34P2-201ENST00000514850 553 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 RNU6-941P-201ENST00000516346 108 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC126177.5-201ENST00000549599 178 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 SUB1P2-201ENST00000556401 297 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.06□□□□□ -1.6
COL6A2P12110 AL035413.2-201ENST00000604801 525 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AC104695.2-201ENST00000605056 775 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AC055876.5-201ENST00000605667 259 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AC008966.2-201ENST00000606157 453 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AP005432.2-201ENST00000608162 586 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 RNA5SP440-201ENST00000612665 119 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC000123.2-201ENST00000623124 461 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL6A2P12110 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.06□□□□□ -1.6
COL6A2P12110 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
COL6A2P12110 SMG1P4-204ENST00000523028 4131 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms