Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPS17P11-201ENST00000474297 293 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 HMGB1P22-201ENST00000505315 124 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.34□□□□□ -2.03
CXCL1P09341 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CXCL1P09341 TBCAP3-201ENST00000512475 312 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 RN7SKP13-201ENST00000515933 244 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 RNU6-1073P-201ENST00000517182 106 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.34□□□□□ -2.03
CXCL1P09341 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.34□□□□□ -2.03
CXCL1P09341 AC092868.3-201ENST00000560515 784 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL1P09341 AL356575.1-201ENST00000603008 283 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 YWHAQP7-201ENST00000603536 658 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 uc_338.25-201ENST00000613756 156 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 Z99129.2-201ENST00000619967 314 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 Z83843.1-201ENST00000604070 3685 ntBASIC2.34□□□□□ -2.04
CXCL1P09341 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CXCL1P09341 AL035425.3-201ENST00000564206 4996 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 GABRG2-229ENST00000641017 3628 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL1P09341 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL1P09341 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.33□□□□□ -2.04
CXCL1P09341 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CXCL1P09341 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL1P09341 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CXCL1P09341 RNU4-35P-201ENST00000362588 141 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL1P09341 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.33□□□□□ -2.04
CXCL1P09341 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.33□□□□□ -2.04
CXCL1P09341 MTCYBP24-201ENST00000420387 1106 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AC023128.2-201ENST00000420880 1223 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AC005517.2-201ENST00000424673 553 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 RPL7P2-201ENST00000427639 268 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL592437.1-201ENST00000443781 492 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 RPL7P15-201ENST00000461190 712 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 KC877373.1-201ENST00000479066 408 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.33□□□□□ -2.04
CXCL1P09341 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.33□□□□□ -2.04
CXCL1P09341 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL1P09341 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL1P09341 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL1P09341 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.33□□□□□ -2.04
CXCL1P09341 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.33□□□□□ -2.04
CXCL1P09341 AC109635.4-202ENST00000531666 412 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL1P09341 HIGD1AP1-201ENST00000550979 275 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL049870.4-201ENST00000555741 486 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL121594.4-201ENST00000556211 1196 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.33□□□□□ -2.04
CXCL1P09341 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL1P09341 AC136624.4-201ENST00000573044 370 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
CXCL1P09341 MIR4276-201ENST00000584832 70 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL590392.1-201ENST00000604960 446 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL1P09341 AC012557.1-201ENST00000607115 611 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL590282.1-201ENST00000610379 1136 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 VIS1.1-201ENST00000610517 203 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL359535.1-201ENST00000612100 1087 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AC243312.2-201ENST00000623340 601 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AL049781.1-201ENST00000623195 3585 ntBASIC2.33□□□□□ -2.04
CXCL1P09341 AP003122.5-201ENST00000527668 3766 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL1P09341 AC234772.1-201ENST00000377927 937 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 RNU6-1293P-201ENST00000384077 107 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 RPS3AP26-201ENST00000398259 784 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC092638.1-201ENST00000411966 1275 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 MRPL50P2-201ENST00000416821 482 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 RPL17P49-201ENST00000443728 411 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 RPL21P23-201ENST00000446654 460 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC027673.1-201ENST00000456245 405 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 NDUFA5P9-201ENST00000472609 340 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC103975.1-201ENST00000482506 483 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC087190.1-201ENST00000484462 480 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.32□□□□□ -2.04
CXCL1P09341 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.32□□□□□ -2.04
CXCL1P09341 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 AC007224.1-201ENST00000564410 144 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL1P09341 AC012182.1-201ENST00000570133 895 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL1P09341 IGHV3-29-201ENST00000604817 344 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 HMGB1P51-201ENST00000605166 638 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 RPL23AP88-201ENST00000605759 454 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 RNU6-156P-201ENST00000621869 107 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms