Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 AC007991.1-201ENST00000522680 631 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC135279.1-201ENST00000543493 504 ntBASIC4.37□□□□□ -1.71
MMP3P08254 UBE2NP1-201ENST00000545592 458 ntBASIC4.37□□□□□ -1.71
MMP3P08254 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.37□□□□□ -1.71
MMP3P08254 GTF2IP22-201ENST00000554443 182 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.37□□□□□ -1.71
MMP3P08254 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.37□□□□□ -1.71
MMP3P08254 AC017100.2-201ENST00000584628 355 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC104662.1-201ENST00000604448 511 ntBASIC4.37□□□□□ -1.71
MMP3P08254 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC124312.4-201ENST00000605533 310 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AL354760.1-201ENST00000608357 643 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 AL354976.1-201ENST00000613843 387 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC009090.3-201ENST00000616553 565 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC091931.1-201ENST00000623488 728 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 AC068137.4-201ENST00000638485 296 ntBASIC4.37□□□□□ -1.71
MMP3P08254 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MMP3P08254 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MMP3P08254 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.37□□□□□ -1.71
MMP3P08254 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 PHKBP1-201ENST00000450951 1951 ntBASIC4.36□□□□□ -1.71
MMP3P08254 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.36□□□□□ -1.71
MMP3P08254 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.36□□□□□ -1.71
MMP3P08254 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MMP3P08254 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MMP3P08254 RNU6-525P-201ENST00000363685 104 ntBASIC4.36□□□□□ -1.71
MMP3P08254 RNU6-553P-201ENST00000364047 96 ntBASIC4.36□□□□□ -1.71
MMP3P08254 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 RPL21P17-201ENST00000397467 475 ntBASIC4.36□□□□□ -1.71
MMP3P08254 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC068533.2-201ENST00000411872 306 ntBASIC4.36□□□□□ -1.71
MMP3P08254 TRGV6-201ENST00000417928 299 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC092647.1-201ENST00000420654 287 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.36□□□□□ -1.71
MMP3P08254 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.36□□□□□ -1.71
MMP3P08254 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 BX119904.4-201ENST00000424402 301 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL591419.1-201ENST00000427423 339 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.36□□□□□ -1.71
MMP3P08254 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.36□□□□□ -1.71
MMP3P08254 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.36□□□□□ -1.71
MMP3P08254 AC092473.1-201ENST00000441098 221 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC118469.1-201ENST00000442943 488 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.36□□□□□ -1.71
MMP3P08254 RSL24D1P3-201ENST00000449255 495 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC005008.1-201ENST00000456151 612 ntBASIC4.36□□□□□ -1.71
MMP3P08254 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
MMP3P08254 RPL5P30-201ENST00000465511 891 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC147055.4-201ENST00000504399 745 ntBASIC4.36□□□□□ -1.71
MMP3P08254 RPL7L1P13-201ENST00000511702 739 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC026726.1-201ENST00000512859 601 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC117532.1-201ENST00000514638 323 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.36□□□□□ -1.71
MMP3P08254 AP001189.2-201ENST00000527320 189 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
MMP3P08254 AC124068.1-201ENST00000563131 678 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC002400.1-201ENST00000569310 726 ntBASIC4.36□□□□□ -1.71
MMP3P08254 OR4K7P-201ENST00000580232 945 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.36□□□□□ -1.71
MMP3P08254 AL390838.2-201ENST00000602394 274 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC009220.3-201ENST00000604318 586 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL161756.2-201ENST00000604597 246 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC010738.1-201ENST00000604970 987 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.36□□□□□ -1.71
MMP3P08254 AL391497.1-201ENST00000608671 547 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC008083.4-201ENST00000615076 444 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL139089.1-201ENST00000620372 975 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AF246928.1-201ENST00000623768 87 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC139792.2-201ENST00000624218 587 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC007494.3-201ENST00000624660 743 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL034408.1-202ENST00000636088 415 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL596275.2-204ENST00000641628 552 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC009093.8-201ENST00000641769 292 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AL596275.2-206ENST00000641957 626 ntBASIC4.36□□□□□ -1.71
MMP3P08254 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.36□□□□□ -1.71
MMP3P08254 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
MMP3P08254 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MMP3P08254 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
MMP3P08254 AC005539.1-201ENST00000443768 1479 ntBASIC4.36□□□□□ -1.71
MMP3P08254 AC024560.2-201ENST00000507981 1497 ntBASIC4.36□□□□□ -1.71
MMP3P08254 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MMP3P08254 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 AC134882.1-201ENST00000603738 1676 ntBASIC4.35□□□□□ -1.71
MMP3P08254 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
MMP3P08254 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
MMP3P08254 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms