Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDGFAP04085 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 AOX3P-204ENST00000491025 2107 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 RNU6-1284P-201ENST00000363701 100 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 RNU11-4P-201ENST00000391149 133 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 SOD2P1-201ENST00000396543 562 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 AL354868.1-201ENST00000417077 482 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 RPL35AP31-201ENST00000418340 337 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 BX284632.2-201ENST00000421091 399 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 AL451139.1-201ENST00000434718 346 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 IPO7P1-201ENST00000442031 636 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 AL359955.2-201ENST00000445380 353 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 ELOCP24-201ENST00000456370 334 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 AC087385.1-201ENST00000475062 312 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC106800.3-201ENST00000511389 308 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 AC005798.1-201ENST00000513715 387 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 RNU6-189P-201ENST00000516120 101 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 RN7SKP82-201ENST00000516786 223 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 IGLV3-6-201ENST00000523937 250 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC079600.1-201ENST00000550326 297 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC007225.2-201ENST00000562529 256 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC104687.2-201ENST00000604442 342 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 AC010401.2-201ENST00000575137 4934 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 OR55B1P-203ENST00000641518 2602 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PDGFAP04085 AC027228.2-201ENST00000567141 2154 ntBASIC5.66□□□□□ -1.5
PDGFAP04085 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFAP04085 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDGFAP04085 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDGFAP04085 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFAP04085 ZNF33CP-201ENST00000432492 2030 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFAP04085 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDGFAP04085 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PDGFAP04085 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PDGFAP04085 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.65□□□□□ -1.5
PDGFAP04085 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 Y_RNA.133-201ENST00000363428 110 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 Y_RNA.482-201ENST00000384377 111 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 RNU6-308P-201ENST00000390957 107 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 RNU6-550P-201ENST00000391057 101 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AL356057.3-201ENST00000402607 340 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 VDAC1P9-201ENST00000412766 841 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 GJA6P-201ENST00000415117 1042 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFAP04085 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.65□□□□□ -1.5
PDGFAP04085 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFAP04085 AL137792.2-201ENST00000443484 235 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 AC010655.1-201ENST00000449336 292 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AL445665.1-202ENST00000452436 324 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC091685.2-201ENST00000454924 864 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 RPL30P15-201ENST00000457129 321 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms