Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 OR8K4P-201ENST00000534608 872 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC026333.2-201ENST00000542164 106 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC092470.1-201ENST00000546187 132 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 SNORD39.3-201ENST00000584451 71 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 MIR4506-201ENST00000584693 77 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 VN1R7P-201ENST00000619242 903 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 MIR6500-201ENST00000622700 86 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC073530.2-201ENST00000623987 261 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 SNORA50A-202ENST00000629536 136 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AP000553.6-201ENST00000641242 118 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 SAGE4P-201ENST00000442271 3381 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC008264.2-201ENST00000610193 3731 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL136520.1-201ENST00000600311 1322 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.65□□□□□ -1.98
HLA-DQA1P01909 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
HLA-DQA1P01909 AC024560.2-201ENST00000507981 1497 ntBASIC2.65□□□□□ -1.98
HLA-DQA1P01909 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 PABPC1P7-201ENST00000413177 1513 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RNU6-374P-201ENST00000364146 108 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RNU6-921P-201ENST00000384361 107 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 MIR649-201ENST00000384843 97 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 SSXP10-201ENST00000402595 565 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 MTCO2P31-201ENST00000402702 684 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RPL31P2-201ENST00000413849 377 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC027644.1-201ENST00000419595 298 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC244098.2-201ENST00000422068 99 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC012498.1-201ENST00000424037 437 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RPL31P54-201ENST00000429803 370 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 MTCYBP15-201ENST00000433123 1127 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC244505.4-201ENST00000434905 287 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 SSXP5-201ENST00000443473 287 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AL592437.1-201ENST00000443781 492 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 NPM1P49-201ENST00000448027 714 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 HMGN3P1-201ENST00000453847 193 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AL136126.1-201ENST00000473603 402 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 HMGB1P38-201ENST00000490557 577 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC048346.1-201ENST00000510247 144 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 NDUFA5P2-201ENST00000519723 344 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 OR7E13P-201ENST00000526052 910 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC010735.1-201ENST00000567305 1026 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC074051.3-201ENST00000570238 358 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RN7SL600P-201ENST00000581811 299 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC010928.3-201ENST00000587712 541 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC008507.2-201ENST00000588402 1176 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC090330.1-201ENST00000588646 764 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC119501.1-201ENST00000603646 475 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC099785.1-201ENST00000605697 437 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 ZYXP1-201ENST00000617638 118 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AC006249.1-201ENST00000621223 471 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AF001550.2-201ENST00000636643 217 ntBASIC2.65□□□□□ -1.99
HLA-DQA1P01909 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DQA1P01909 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms