Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 GAPDHP36-201ENST00000480688 918 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC093840.1-201ENST00000511599 336 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC010587.2-201ENST00000511727 448 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.79□□□□□ -1.8
CLPTM1O96005 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 ZNF192P1-203ENST00000565888 810 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 MIR4284-201ENST00000578924 81 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC008687.2-201ENST00000597865 520 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 Z99497.2-201ENST00000603634 310 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 VIS1.1-201ENST00000610517 203 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC090246.1-201ENST00000616499 426 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC124312.6-202ENST00000623624 418 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC011944.2-201ENST00000624440 683 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC140479.6-201ENST00000633535 357 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AP003399.1-201ENST00000637534 361 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC103706.2-201ENST00000638080 240 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLPTM1O96005 SGO1P2-201ENST00000429458 1589 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AF127577.6-201ENST00000623352 2191 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1O96005 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1O96005 AL512646.1-201ENST00000269395 1077 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 OR5P1P-201ENST00000299512 925 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 RNU6-1151P-201ENST00000384684 107 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLPTM1O96005 RNU6-1300P-201ENST00000391046 108 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 PTMAP5-201ENST00000393073 333 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 RPL23AP47-201ENST00000408017 460 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 RNU4-72P-201ENST00000410754 173 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 P2RY10P2-201ENST00000416730 913 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AL593851.1-201ENST00000426171 157 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 PNPLA4P1-201ENST00000458328 305 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1O96005 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.78□□□□□ -1.8
CLPTM1O96005 WBP1LP4-201ENST00000505043 344 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AC079395.1-201ENST00000510981 262 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLPTM1O96005 RNU6-1225P-201ENST00000516336 65 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 MTCO1P47-201ENST00000523889 1271 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AL356057.1-201ENST00000533798 831 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 ELOCP32-201ENST00000548625 324 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1O96005 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1O96005 AC079587.1-201ENST00000603846 277 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AL358072.1-201ENST00000604156 575 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AC008121.2-201ENST00000614647 523 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.78□□□□□ -1.8
CLPTM1O96005 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1O96005 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.78□□□□□ -1.8
CLPTM1O96005 Z82217.1-201ENST00000625157 8149 ntBASIC3.78□□□□□ -1.8
CLPTM1O96005 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1O96005 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CLPTM1O96005 AP000526.1-201ENST00000603308 1388 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1O96005 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1O96005 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1O96005 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms