Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.87□□□□□ -1.63
CNOT4O95628 AC002550.2-201ENST00000621246 394 ntBASIC4.87□□□□□ -1.63
CNOT4O95628 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNOT4O95628 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.87□□□□□ -1.63
CNOT4O95628 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CNOT4O95628 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CNOT4O95628 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CNOT4O95628 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNOT4O95628 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CNOT4O95628 CCT4P2-201ENST00000233836 1548 ntBASIC4.87□□□□□ -1.63
CNOT4O95628 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.87□□□□□ -1.63
CNOT4O95628 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CNOT4O95628 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
CNOT4O95628 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.86□□□□□ -1.63
CNOT4O95628 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 AC092681.1-201ENST00000297369 291 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNOT4O95628 Y_RNA.166-201ENST00000363730 102 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 MIR153-1-201ENST00000384914 90 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RPS20P2-201ENST00000402520 389 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AL133270.1-201ENST00000402635 279 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 HMGB1P17-201ENST00000403495 628 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CNOT4O95628 RNU2-8P-201ENST00000410727 190 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC096921.1-201ENST00000411661 375 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 OR9R1P-201ENST00000412200 877 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.86□□□□□ -1.63
CNOT4O95628 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.86□□□□□ -1.63
CNOT4O95628 PDCL2P1-201ENST00000419302 352 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RPL31P45-201ENST00000419532 356 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 EIF1P3-201ENST00000423841 334 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 OR51AB1P-201ENST00000429046 620 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RSU1P2-202ENST00000437884 485 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RPS11P7-201ENST00000442125 465 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC105399.1-202ENST00000447303 205 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RPS23P9-201ENST00000448848 438 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 NIPA2P5-201ENST00000452282 464 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RNU7-136P-201ENST00000458819 69 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC004453.1-201ENST00000487895 408 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC139783.2-201ENST00000504847 1145 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC024558.1-201ENST00000505008 528 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.86□□□□□ -1.63
CNOT4O95628 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.86□□□□□ -1.63
CNOT4O95628 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.86□□□□□ -1.63
CNOT4O95628 RN7SKP99-201ENST00000517028 307 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CNOT4O95628 HMGN2P6-201ENST00000551091 273 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.86□□□□□ -1.63
CNOT4O95628 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.86□□□□□ -1.63
CNOT4O95628 AC015917.1-201ENST00000579654 510 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.86□□□□□ -1.63
CNOT4O95628 COX6CP4-201ENST00000605798 228 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AL022394.1-201ENST00000606979 292 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC105429.2-201ENST00000610567 517 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 AC068722.2-201ENST00000618734 544 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 uc_338.7-201ENST00000621834 124 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.86□□□□□ -1.63
CNOT4O95628 AC074101.1-201ENST00000637861 241 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNOT4O95628 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 MAPK10-328ENST00000641553 4009 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 ELL2P4-201ENST00000446870 1376 ntBASIC4.86□□□□□ -1.63
CNOT4O95628 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.86□□□□□ -1.63
CNOT4O95628 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNOT4O95628 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.86□□□□□ -1.63
CNOT4O95628 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNOT4O95628 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.86□□□□□ -1.63
CNOT4O95628 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.86□□□□□ -1.63
CNOT4O95628 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.86□□□□□ -1.63
CNOT4O95628 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNOT4O95628 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
CNOT4O95628 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CNOT4O95628 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.85□□□□□ -1.63
CNOT4O95628 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNOT4O95628 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.85□□□□□ -1.63
CNOT4O95628 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CNOT4O95628 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNOT4O95628 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNOT4O95628 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CNOT4O95628 Y_RNA.157-201ENST00000363638 102 ntBASIC4.85□□□□□ -1.63
CNOT4O95628 RNA5SP234-201ENST00000363916 119 ntBASIC4.85□□□□□ -1.63
CNOT4O95628 SNORA51.2-201ENST00000364595 132 ntBASIC4.85□□□□□ -1.63
CNOT4O95628 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.85□□□□□ -1.63
CNOT4O95628 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.85□□□□□ -1.63
CNOT4O95628 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.85□□□□□ -1.63
CNOT4O95628 RPL23AP27-201ENST00000415161 451 ntBASIC4.85□□□□□ -1.63
CNOT4O95628 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.85□□□□□ -1.63
CNOT4O95628 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.85□□□□□ -1.63
CNOT4O95628 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.85□□□□□ -1.63
CNOT4O95628 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.85□□□□□ -1.63
CNOT4O95628 IGHV5-78-201ENST00000450948 295 ntBASIC4.85□□□□□ -1.63
CNOT4O95628 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.85□□□□□ -1.63
CNOT4O95628 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.85□□□□□ -1.63
CNOT4O95628 RPL37P6-202ENST00000464216 403 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms