Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.85□□□□□ -1.31
RNF40O75150 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 LINC02019-201ENST00000608605 2060 ntBASIC6.85□□□□□ -1.31
RNF40O75150 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RNF40O75150 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RNF40O75150 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 Y_RNA.200-201ENST00000364018 102 ntBASIC6.84□□□□□ -1.31
RNF40O75150 RNA5SP77-201ENST00000365394 120 ntBASIC6.84□□□□□ -1.31
RNF40O75150 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 Y_RNA.577-201ENST00000384794 101 ntBASIC6.84□□□□□ -1.31
RNF40O75150 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.84□□□□□ -1.31
RNF40O75150 RNU2-25P-201ENST00000411041 191 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 RHOT1P3-201ENST00000436571 331 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 RNU7-120P-201ENST00000459334 63 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC087884.1-201ENST00000469738 328 ntBASIC6.84□□□□□ -1.31
RNF40O75150 RN7SL362P-201ENST00000494228 267 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC105384.2-201ENST00000508433 640 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC067942.3-201ENST00000512025 362 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC093853.1-201ENST00000515689 483 ntBASIC6.84□□□□□ -1.31
RNF40O75150 RN7SKP82-201ENST00000516786 223 ntBASIC6.84□□□□□ -1.31
RNF40O75150 RNA5SP441-201ENST00000516809 88 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF40O75150 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF40O75150 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF40O75150 CBX3P4-201ENST00000538909 354 ntBASIC6.84□□□□□ -1.31
RNF40O75150 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
RNF40O75150 LSM6P2-201ENST00000552208 177 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF40O75150 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF40O75150 AC012443.1-201ENST00000605605 231 ntBASIC6.84□□□□□ -1.31
RNF40O75150 SNORD96A-201ENST00000606577 79 ntBASIC6.84□□□□□ -1.31
RNF40O75150 AC009570.1-201ENST00000609599 745 ntBASIC6.84□□□□□ -1.31
RNF40O75150 RN7SL261P-201ENST00000613441 282 ntBASIC6.84□□□□□ -1.31
RNF40O75150 uc_338.31-201ENST00000615595 186 ntBASIC6.84□□□□□ -1.31
RNF40O75150 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.84□□□□□ -1.31
RNF40O75150 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF40O75150 AP001052.1-201ENST00000626421 99 ntBASIC6.84□□□□□ -1.31
RNF40O75150 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF40O75150 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 EIF2AP4-201ENST00000424793 1781 ntBASIC6.84□□□□□ -1.31
RNF40O75150 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RNF40O75150 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF40O75150 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF40O75150 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF40O75150 AC027287.1-201ENST00000553115 1453 ntBASIC6.84□□□□□ -1.31
RNF40O75150 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
RNF40O75150 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
RNF40O75150 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 TRIM51GP-201ENST00000534741 1350 ntBASIC6.83□□□□□ -1.32
RNF40O75150 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
RNF40O75150 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 HSPA8P14-201ENST00000552265 1805 ntBASIC6.83□□□□□ -1.32
RNF40O75150 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
RNF40O75150 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF40O75150 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 RNU6-704P-201ENST00000364162 103 ntBASIC6.83□□□□□ -1.32
RNF40O75150 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 RNU6-1203P-201ENST00000410703 110 ntBASIC6.83□□□□□ -1.32
RNF40O75150 RPSAP65-201ENST00000429660 595 ntBASIC6.83□□□□□ -1.32
RNF40O75150 PSMA2P3-201ENST00000429685 675 ntBASIC6.83□□□□□ -1.32
RNF40O75150 GAPDHP59-201ENST00000435908 267 ntBASIC6.83□□□□□ -1.32
RNF40O75150 OR3D1P-201ENST00000438288 955 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF40O75150 POU5F1P5-201ENST00000445059 658 ntBASIC6.83□□□□□ -1.32
RNF40O75150 HMGN1P2-201ENST00000445197 310 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF40O75150 AC096745.1-201ENST00000509945 370 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AC108471.1-201ENST00000513977 287 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AC109329.1-201ENST00000518744 317 ntBASIC6.83□□□□□ -1.32
RNF40O75150 IGHV1-14-201ENST00000523391 241 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF40O75150 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF40O75150 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF40O75150 AC006512.2-201ENST00000543250 486 ntBASIC6.83□□□□□ -1.32
RNF40O75150 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RNF40O75150 RN7SL270P-201ENST00000579643 281 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RNF40O75150 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AC011921.2-201ENST00000589465 152 ntBASIC6.83□□□□□ -1.32
RNF40O75150 RNU6-84P-201ENST00000607737 102 ntBASIC6.83□□□□□ -1.32
RNF40O75150 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF40O75150 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms