Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHOX2O60902 SNORD9-201ENST00000362566 104 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 RNA5SP51-201ENST00000364750 119 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 RNU4-74P-201ENST00000411280 161 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.24□□□□□ -1.89
SHOX2O60902 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.24□□□□□ -1.89
SHOX2O60902 RPS29P6-201ENST00000438196 145 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 CYCSP43-201ENST00000438233 310 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 RPL21P2-201ENST00000440049 481 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 CYCSP32-201ENST00000440548 321 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.24□□□□□ -1.89
SHOX2O60902 RPL39P40-201ENST00000445481 146 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 RPL29P29-201ENST00000448725 423 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 AC078918.1-201ENST00000498515 228 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
SHOX2O60902 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.24□□□□□ -1.89
SHOX2O60902 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.24□□□□□ -1.89
SHOX2O60902 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.24□□□□□ -1.89
SHOX2O60902 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.24□□□□□ -1.89
SHOX2O60902 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.24□□□□□ -1.89
SHOX2O60902 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.24□□□□□ -1.89
SHOX2O60902 AC006557.5-201ENST00000603126 811 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 AC112230.1-201ENST00000604342 547 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 AC127502.3-201ENST00000636170 1206 ntBASIC3.24□□□□□ -1.89
SHOX2O60902 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHOX2O60902 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SHOX2O60902 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.23□□□□□ -1.89
SHOX2O60902 ASNSP3-201ENST00000451989 1306 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHOX2O60902 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SHOX2O60902 RNA5SP391-201ENST00000363456 119 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 RNA5SP189-201ENST00000364920 115 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 RNU6-152P-201ENST00000384037 107 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 U8.11-201ENST00000384699 133 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 U8.12-201ENST00000384701 133 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AL357075.1-201ENST00000404107 726 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 HMGB1P13-201ENST00000406019 642 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC096664.2-201ENST00000411843 406 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.23□□□□□ -1.89
SHOX2O60902 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.23□□□□□ -1.89
SHOX2O60902 SAR1AP4-201ENST00000429225 591 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 SETP5-201ENST00000437270 562 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHOX2O60902 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.23□□□□□ -1.89
SHOX2O60902 TPTE2P6-202ENST00000445572 1007 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.23□□□□□ -1.89
SHOX2O60902 U8.18-201ENST00000459285 133 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 RPL7P23-201ENST00000493874 747 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.23□□□□□ -1.89
SHOX2O60902 PRELID3BP6-201ENST00000503839 571 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.23□□□□□ -1.89
SHOX2O60902 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHOX2O60902 OR4R3P-201ENST00000525084 838 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.23□□□□□ -1.89
SHOX2O60902 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.23□□□□□ -1.89
SHOX2O60902 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.23□□□□□ -1.89
SHOX2O60902 HSPE1P5-201ENST00000561489 272 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC034268.2-201ENST00000571784 482 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 MIR5685-201ENST00000579080 79 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.23□□□□□ -1.89
SHOX2O60902 AC113194.1-201ENST00000606037 500 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC107871.2-201ENST00000612894 502 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AL442067.2-201ENST00000614033 363 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 MIR6852-201ENST00000621699 66 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.23□□□□□ -1.89
SHOX2O60902 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHOX2O60902 AP003122.5-201ENST00000527668 3766 ntBASIC3.23□□□□□ -1.89
SHOX2O60902 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHOX2O60902 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.22□□□□□ -1.89
SHOX2O60902 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
SHOX2O60902 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SHOX2O60902 RNA5SP72-201ENST00000364442 117 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 AC007066.1-201ENST00000392902 381 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 DNAJC19P6-201ENST00000401853 280 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 RNU2-65P-201ENST00000410162 185 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHOX2O60902 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.22□□□□□ -1.89
SHOX2O60902 AL035246.1-201ENST00000433554 1255 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.22□□□□□ -1.89
SHOX2O60902 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.22□□□□□ -1.89
SHOX2O60902 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.22□□□□□ -1.89
SHOX2O60902 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHOX2O60902 RPS26P21-201ENST00000475397 348 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 RPS29P2-201ENST00000479278 136 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHOX2O60902 AC025459.1-201ENST00000504072 156 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.22□□□□□ -1.89
SHOX2O60902 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.22□□□□□ -1.89
SHOX2O60902 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.22□□□□□ -1.89
SHOX2O60902 RN7SKP116-201ENST00000516902 319 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 AP001207.1-201ENST00000524051 481 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 OR5G4P-201ENST00000525251 760 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 OR8L1P-201ENST00000534005 955 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms