Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC022655.2-201ENST00000577280 318 ntBASIC4.17□□□□□ -1.74
LDB2O43679 LINC00901.1-201ENST00000617252 152 ntBASIC4.17□□□□□ -1.74
LDB2O43679 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDB2O43679 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LDB2O43679 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LDB2O43679 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDB2O43679 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.17□□□□□ -1.74
LDB2O43679 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.17□□□□□ -1.74
LDB2O43679 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.16□□□□□ -1.74
LDB2O43679 AL118496.1-201ENST00000440201 1812 ntBASIC4.16□□□□□ -1.74
LDB2O43679 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 OR52B1P-201ENST00000316506 909 ntBASIC4.16□□□□□ -1.74
LDB2O43679 RNU6-216P-201ENST00000363282 104 ntBASIC4.16□□□□□ -1.74
LDB2O43679 RNU6-444P-201ENST00000383988 108 ntBASIC4.16□□□□□ -1.74
LDB2O43679 SNORA70C-201ENST00000384538 135 ntBASIC4.16□□□□□ -1.74
LDB2O43679 RPL23AP29-201ENST00000397284 453 ntBASIC4.16□□□□□ -1.74
LDB2O43679 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.16□□□□□ -1.74
LDB2O43679 CYCSP10-201ENST00000417973 294 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AC008280.1-201ENST00000418851 412 ntBASIC4.16□□□□□ -1.74
LDB2O43679 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.16□□□□□ -1.74
LDB2O43679 AL353706.1-201ENST00000436728 494 ntBASIC4.16□□□□□ -1.74
LDB2O43679 RPL23AP46-201ENST00000438548 490 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.16□□□□□ -1.74
LDB2O43679 RPL18AP17-201ENST00000455326 198 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AC006511.1-201ENST00000470614 315 ntBASIC4.16□□□□□ -1.74
LDB2O43679 UQCRHP4-201ENST00000471686 272 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AC025554.1-201ENST00000505641 188 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.16□□□□□ -1.74
LDB2O43679 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LDB2O43679 MTCO2P32-201ENST00000514865 403 ntBASIC4.16□□□□□ -1.74
LDB2O43679 MRPL49P2-201ENST00000521066 465 ntBASIC4.16□□□□□ -1.74
LDB2O43679 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LDB2O43679 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 AC012213.3-201ENST00000577199 777 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.16□□□□□ -1.74
LDB2O43679 RSL24D1P11-201ENST00000591045 491 ntBASIC4.16□□□□□ -1.74
LDB2O43679 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 AC073544.2-201ENST00000601155 540 ntBASIC4.16□□□□□ -1.74
LDB2O43679 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.16□□□□□ -1.74
LDB2O43679 MIR7844-201ENST00000616161 122 ntBASIC4.16□□□□□ -1.74
LDB2O43679 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LDB2O43679 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.16□□□□□ -1.74
LDB2O43679 LINC00561-201ENST00000565815 2738 ntBASIC4.16□□□□□ -1.74
LDB2O43679 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.16□□□□□ -1.74
LDB2O43679 ERCC6-202ENST00000374127 1782 ntBASIC4.16□□□□□ -1.74
LDB2O43679 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDB2O43679 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.16□□□□□ -1.74
LDB2O43679 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.16□□□□□ -1.74
LDB2O43679 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.15□□□□□ -1.74
LDB2O43679 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.15□□□□□ -1.74
LDB2O43679 MTND4P5-201ENST00000435821 1374 ntBASIC4.15□□□□□ -1.74
LDB2O43679 LARP1BP1-201ENST00000506036 1359 ntBASIC4.15□□□□□ -1.74
LDB2O43679 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LDB2O43679 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LDB2O43679 CYP1D1P-201ENST00000416662 1433 ntBASIC4.15□□□□□ -1.74
LDB2O43679 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
LDB2O43679 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LDB2O43679 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LDB2O43679 AL121657.1-201ENST00000327215 531 ntBASIC4.15□□□□□ -1.75
LDB2O43679 MIR383-201ENST00000362257 73 ntBASIC4.15□□□□□ -1.75
LDB2O43679 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 RNU6-1122P-201ENST00000384449 107 ntBASIC4.15□□□□□ -1.75
LDB2O43679 MIR513A2-201ENST00000385249 127 ntBASIC4.15□□□□□ -1.75
LDB2O43679 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 RPL7P8-201ENST00000411964 730 ntBASIC4.15□□□□□ -1.75
LDB2O43679 MTCYBP38-201ENST00000417160 1123 ntBASIC4.15□□□□□ -1.75
LDB2O43679 RPL23AP38-201ENST00000423801 469 ntBASIC4.15□□□□□ -1.75
LDB2O43679 RPS27AP12-201ENST00000429552 465 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.15□□□□□ -1.75
LDB2O43679 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.15□□□□□ -1.75
LDB2O43679 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.15□□□□□ -1.75
LDB2O43679 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.15□□□□□ -1.75
LDB2O43679 AC006011.1-201ENST00000442758 349 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.15□□□□□ -1.75
LDB2O43679 AC073587.1-201ENST00000447093 876 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.15□□□□□ -1.75
LDB2O43679 SLC31A1P1-201ENST00000451221 567 ntBASIC4.15□□□□□ -1.75
LDB2O43679 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.15□□□□□ -1.75
LDB2O43679 OR6C5P-201ENST00000452388 923 ntBASIC4.15□□□□□ -1.75
LDB2O43679 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 HMGN3P1-201ENST00000453847 193 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC068724.1-201ENST00000487100 792 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC108078.3-201ENST00000502633 489 ntBASIC4.15□□□□□ -1.75
LDB2O43679 KRT19P6-201ENST00000510983 209 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.15□□□□□ -1.75
LDB2O43679 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.15□□□□□ -1.75
LDB2O43679 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.15□□□□□ -1.75
LDB2O43679 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
LDB2O43679 DYNLL1P4-201ENST00000549314 266 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.15□□□□□ -1.75
LDB2O43679 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
LDB2O43679 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms