Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPS3AP23-201ENST00000401762 784 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 Y_RNA.598-201ENST00000410480 95 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.59□□□□□ -1.67
PHGDHO43175 RPL23AP27-201ENST00000415161 451 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 RPL36AP36-201ENST00000418616 301 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.59□□□□□ -1.67
PHGDHO43175 OR8F1P-201ENST00000425243 930 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.59□□□□□ -1.67
PHGDHO43175 RPS27AP12-201ENST00000429552 465 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 USP9YP14-201ENST00000430663 563 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 CKS1BP5-201ENST00000434172 273 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.59□□□□□ -1.67
PHGDHO43175 RPL23AP33-201ENST00000442301 452 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AL590399.6-201ENST00000446396 307 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 OR1H1P-201ENST00000448731 937 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.59□□□□□ -1.67
PHGDHO43175 SBDSP1-204ENST00000453858 737 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 snoU13.8-201ENST00000458890 104 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 RPS4XP10-201ENST00000465034 731 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 RPL7AP6-201ENST00000477943 801 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 RPL21P103-201ENST00000479921 488 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.59□□□□□ -1.67
PHGDHO43175 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.59□□□□□ -1.67
PHGDHO43175 AC108064.1-201ENST00000513791 460 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC093677.1-201ENST00000514414 678 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 RNA5SP446-201ENST00000515955 82 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 PAICSP4-201ENST00000517543 1253 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.59□□□□□ -1.67
PHGDHO43175 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.59□□□□□ -1.67
PHGDHO43175 AC022880.1-201ENST00000534017 973 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AL391156.1-201ENST00000554965 554 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.59□□□□□ -1.67
PHGDHO43175 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.59□□□□□ -1.67
PHGDHO43175 AC105129.1-201ENST00000560250 297 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.59□□□□□ -1.67
PHGDHO43175 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PHGDHO43175 AC016180.1-201ENST00000567945 403 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC090229.1-201ENST00000590983 1609 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC011487.3-201ENST00000593607 453 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 BNIP3P8-201ENST00000597863 560 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.59□□□□□ -1.67
PHGDHO43175 AC073091.2-201ENST00000603205 907 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AL355812.1-201ENST00000603215 216 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 LLPHP1-201ENST00000603571 367 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC010680.4-201ENST00000605334 543 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.59□□□□□ -1.67
PHGDHO43175 AC006329.2-201ENST00000611491 394 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.59□□□□□ -1.67
PHGDHO43175 EOGT-210ENST00000615922 1931 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC138932.5-201ENST00000617759 563 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AL596245.1-201ENST00000618994 362 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 AC087385.3-201ENST00000620477 187 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.59□□□□□ -1.67
PHGDHO43175 AL391684.1-202ENST00000641293 1636 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
PHGDHO43175 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PHGDHO43175 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PHGDHO43175 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 OR51H2P-202ENST00000641424 3046 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RNY4P24-201ENST00000362735 96 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RNU4-44P-201ENST00000363050 141 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RNU1-20P-201ENST00000363314 162 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 SNORA51.8-201ENST00000384234 132 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RNA5SP372-201ENST00000390836 115 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 SNORA40.3-201ENST00000390964 122 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 OR6C69P-201ENST00000394268 893 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 HDGFP1-201ENST00000405943 252 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AL031779.1-201ENST00000415663 330 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.58□□□□□ -1.68
PHGDHO43175 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.58□□□□□ -1.68
PHGDHO43175 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 FAM103A2P-201ENST00000444122 354 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 H2AFZP5-201ENST00000446960 382 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PHGDHO43175 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.58□□□□□ -1.68
PHGDHO43175 Z82190.1-201ENST00000454534 490 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 RN7SL817P-201ENST00000480777 288 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.58□□□□□ -1.68
PHGDHO43175 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PHGDHO43175 OR5M14P-201ENST00000506803 618 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 KCTD9P2-201ENST00000512203 1013 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.58□□□□□ -1.68
PHGDHO43175 MTND4LP31-201ENST00000514859 294 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RNU6-27P-201ENST00000516146 107 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 RN7SKP116-201ENST00000516902 319 ntBASIC4.58□□□□□ -1.68
PHGDHO43175 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.58□□□□□ -1.68
PHGDHO43175 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.58□□□□□ -1.68
PHGDHO43175 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms