Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL159169.3-201ENST00000608871 561 ntBASIC3.88□□□□□ -1.79
TO15178 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.88□□□□□ -1.79
TO15178 AC012531.5-201ENST00000611375 151 ntBASIC3.88□□□□□ -1.79
TO15178 MIR6716-201ENST00000613413 80 ntBASIC3.88□□□□□ -1.79
TO15178 MLECP1-201ENST00000615893 709 ntBASIC3.88□□□□□ -1.79
TO15178 AC091304.6-201ENST00000619761 202 ntBASIC3.88□□□□□ -1.79
TO15178 AC092650.2-201ENST00000619984 902 ntBASIC3.88□□□□□ -1.79
TO15178 AC048347.1-201ENST00000624621 427 ntBASIC3.88□□□□□ -1.79
TO15178 OR52H1-202ENST00000641796 1061 ntBASIC3.88□□□□□ -1.79
TO15178 USP8P1-201ENST00000494673 3183 ntBASIC3.88□□□□□ -1.79
TO15178 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TO15178 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TO15178 LARP1BP1-201ENST00000506036 1359 ntBASIC3.88□□□□□ -1.79
TO15178 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
TO15178 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TO15178 MAPK10-372ENST00000641954 3413 ntBASIC3.88□□□□□ -1.79
TO15178 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TO15178 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TO15178 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.87□□□□□ -1.79
TO15178 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.87□□□□□ -1.79
TO15178 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TO15178 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.87□□□□□ -1.79
TO15178 FAM3C2-201ENST00000312214 681 ntBASIC3.87□□□□□ -1.79
TO15178 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 SNORA31-201ENST00000362607 130 ntBASIC3.87□□□□□ -1.79
TO15178 SNORD6-201ENST00000365444 73 ntBASIC3.87□□□□□ -1.79
TO15178 SNORA62-201ENST00000365493 153 ntBASIC3.87□□□□□ -1.79
TO15178 SNRPEP2-201ENST00000397592 279 ntBASIC3.87□□□□□ -1.79
TO15178 AL049545.1-201ENST00000401856 572 ntBASIC3.87□□□□□ -1.79
TO15178 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.87□□□□□ -1.79
TO15178 COX6B1P7-201ENST00000430845 235 ntBASIC3.87□□□□□ -1.79
TO15178 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TO15178 RPL23AP89-201ENST00000439324 255 ntBASIC3.87□□□□□ -1.79
TO15178 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 VN1R40P-201ENST00000455196 941 ntBASIC3.87□□□□□ -1.79
TO15178 RPL18AP17-201ENST00000455326 198 ntBASIC3.87□□□□□ -1.79
TO15178 CEACAMP4-201ENST00000457676 421 ntBASIC3.87□□□□□ -1.79
TO15178 AC105137.1-201ENST00000484355 562 ntBASIC3.87□□□□□ -1.79
TO15178 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.87□□□□□ -1.79
TO15178 RPS27AP13-201ENST00000498403 237 ntBASIC3.87□□□□□ -1.79
TO15178 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.87□□□□□ -1.79
TO15178 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.87□□□□□ -1.79
TO15178 HIGD1AP3-201ENST00000515857 278 ntBASIC3.87□□□□□ -1.79
TO15178 RN7SKP122-201ENST00000515923 296 ntBASIC3.87□□□□□ -1.79
TO15178 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 DUXAP6-201ENST00000553858 601 ntBASIC3.87□□□□□ -1.79
TO15178 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.87□□□□□ -1.79
TO15178 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 AC090888.2-201ENST00000559765 1144 ntBASIC3.87□□□□□ -1.79
TO15178 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.87□□□□□ -1.79
TO15178 AC145350.1-201ENST00000567426 208 ntBASIC3.87□□□□□ -1.79
TO15178 CYP4A43P-201ENST00000568156 121 ntBASIC3.87□□□□□ -1.79
TO15178 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.87□□□□□ -1.79
TO15178 AC023575.1-201ENST00000580510 358 ntBASIC3.87□□□□□ -1.79
TO15178 OR4G1P-201ENST00000588632 938 ntBASIC3.87□□□□□ -1.79
TO15178 CLIC4P2-201ENST00000601934 717 ntBASIC3.87□□□□□ -1.79
TO15178 AC006270.3-201ENST00000605967 1036 ntBASIC3.87□□□□□ -1.79
TO15178 HMGN2P28-201ENST00000606102 262 ntBASIC3.87□□□□□ -1.79
TO15178 AC245297.2-201ENST00000610119 565 ntBASIC3.87□□□□□ -1.79
TO15178 MIR378J-201ENST00000611988 109 ntBASIC3.87□□□□□ -1.79
TO15178 AL450489.1-201ENST00000612071 468 ntBASIC3.87□□□□□ -1.79
TO15178 AC017037.3-201ENST00000625016 472 ntBASIC3.87□□□□□ -1.79
TO15178 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.87□□□□□ -1.79
TO15178 AC097655.1-201ENST00000635075 318 ntBASIC3.87□□□□□ -1.79
TO15178 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TO15178 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
TO15178 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.87□□□□□ -1.79
TO15178 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
TO15178 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
TO15178 AC090337.1-201ENST00000579651 2074 ntBASIC3.86□□□□□ -1.79
TO15178 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TO15178 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TO15178 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TO15178 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TO15178 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TO15178 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.86□□□□□ -1.79
TO15178 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TO15178 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.86□□□□□ -1.79
TO15178 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.86□□□□□ -1.79
TO15178 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TO15178 AL024474.1-201ENST00000404655 591 ntBASIC3.86□□□□□ -1.79
TO15178 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TO15178 VPS26BP1-201ENST00000417155 755 ntBASIC3.86□□□□□ -1.79
TO15178 NIPA2P1-201ENST00000426223 976 ntBASIC3.86□□□□□ -1.79
TO15178 MTND5P25-201ENST00000430499 799 ntBASIC3.86□□□□□ -1.79
TO15178 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TO15178 KCTD10P1-201ENST00000434203 625 ntBASIC3.86□□□□□ -1.79
TO15178 RPL21P112-201ENST00000434403 463 ntBASIC3.86□□□□□ -1.79
TO15178 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.86□□□□□ -1.79
TO15178 RPS25P9-201ENST00000435591 252 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms