Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.98□□□□□ -1.93
UPK1AO00322 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 AP000619.3-201ENST00000535634 1127 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 AC074029.1-201ENST00000552531 1044 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 OR4T1P-201ENST00000554933 911 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 RN7SL339P-201ENST00000580597 296 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.98□□□□□ -1.93
UPK1AO00322 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 NTAN1P1-201ENST00000603150 646 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 ELOCP35-201ENST00000604289 336 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC079610.2-201ENST00000604818 690 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 uc_338.25-201ENST00000613756 156 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC104820.1-201ENST00000624183 307 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
UPK1AO00322 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.97□□□□□ -1.93
UPK1AO00322 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
UPK1AO00322 MIR591-201ENST00000385290 95 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 SNORA48.7-201ENST00000391302 135 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.97□□□□□ -1.93
UPK1AO00322 AC005326.1-201ENST00000429197 123 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 RPS7P5-201ENST00000441482 581 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.97□□□□□ -1.93
UPK1AO00322 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 HMGB1P48-201ENST00000446155 598 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC069540.1-201ENST00000446320 988 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 Z75741.1-201ENST00000446793 314 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC239367.2-201ENST00000447309 705 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
UPK1AO00322 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
UPK1AO00322 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.97□□□□□ -1.93
UPK1AO00322 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.97□□□□□ -1.93
UPK1AO00322 RN7SKP43-201ENST00000516173 320 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.97□□□□□ -1.93
UPK1AO00322 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.97□□□□□ -1.93
UPK1AO00322 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.97□□□□□ -1.93
UPK1AO00322 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 OR4H12P-201ENST00000556269 907 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.97□□□□□ -1.93
UPK1AO00322 MIR1254-2-201ENST00000579553 63 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.97□□□□□ -1.93
UPK1AO00322 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
UPK1AO00322 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.97□□□□□ -1.93
UPK1AO00322 MIR6075-201ENST00000620782 95 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 FAM157B-203ENST00000639350 358 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 XPOTP1-201ENST00000443317 2398 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 AL133383.2-201ENST00000622958 2336 ntBASIC2.97□□□□□ -1.93
UPK1AO00322 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK1AO00322 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
UPK1AO00322 AC005183.1-201ENST00000603687 1979 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK1AO00322 MIR7-3-201ENST00000384898 110 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 TAF9BP1-201ENST00000396646 746 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 TAF9BP2-201ENST00000400856 499 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 RN7SKP27-201ENST00000410684 333 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 XKRYP4-201ENST00000414395 483 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 YME1L1P1-201ENST00000429435 297 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 ZNF965P-201ENST00000432501 817 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 RSL24D1P2-201ENST00000445584 366 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK1AO00322 GAPDHP27-201ENST00000447427 1020 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 RPL29P29-201ENST00000448725 423 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 XKRYP5-201ENST00000449659 483 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 SLC31A1P1-201ENST00000451221 567 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.96□□□□□ -1.94
UPK1AO00322 AC146507.1-201ENST00000468335 354 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 RPL5P23-201ENST00000496040 868 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UPK1AO00322 HSPD1P15-201ENST00000505573 1122 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.96□□□□□ -1.94
UPK1AO00322 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 AC093755.1-201ENST00000512950 1023 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms