Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 KLRA1P-201ENST00000503499 986 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 RNU6-311P-201ENST00000516224 102 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 RNU7-143P-201ENST00000516781 65 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 OR4A12P-201ENST00000530847 918 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC008127.2-201ENST00000549925 1075 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 MIR3158-1-201ENST00000583596 81 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AL451086.1-201ENST00000605596 223 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC013470.4-201ENST00000619978 986 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 RNU4-92P-201ENST00000363783 136 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 RNU6-263P-201ENST00000363811 107 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 Y_RNA.465-201ENST00000384293 102 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 SNRPEP2-201ENST00000397592 279 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AL590704.1-201ENST00000402856 794 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 MIR1251-201ENST00000408552 70 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 RNU4-78P-201ENST00000410940 126 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AL391219.1-201ENST00000422570 483 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AL358472.1-201ENST00000431295 329 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 USP9YP31-201ENST00000431405 881 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC007389.2-201ENST00000434630 306 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 TBCAP1-201ENST00000436520 327 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 USP9YP7-201ENST00000436723 430 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 USP9YP32-201ENST00000452432 430 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AP002812.1-201ENST00000495378 474 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 SETP14-201ENST00000497538 873 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC108078.3-201ENST00000502633 489 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC093767.1-201ENST00000504523 156 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC020699.1-201ENST00000505161 445 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 SNORA67.7-201ENST00000516664 135 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC107954.1-201ENST00000565906 727 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 CCDC58P3-201ENST00000590792 430 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC107075.1-201ENST00000613695 314 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AC069209.1-201ENST00000619282 651 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AL713922.2-201ENST00000619384 716 ntBASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPIPA3F8WFD2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 CDR1-202ENST00000625883 1485 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC007685.1-201ENST00000329806 452 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 RNA5SP52-201ENST00000362448 134 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms