Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 UBE2FP2-201ENST00000566646 462 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 BNIP3P8-201ENST00000597863 560 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 PRELID3BP8-201ENST00000604148 295 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AP000860.1-201ENST00000605250 559 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC090970.3-201ENST00000612566 866 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AP001506.1-201ENST00000615444 211 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 uc_338.18-201ENST00000615451 175 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC027807.2-201ENST00000616099 408 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 RNU6-156P-201ENST00000621869 107 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 CR381653.2-201ENST00000624041 768 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 CR381572.2-201ENST00000624852 397 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 OR5H6-203ENST00000642105 978 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 AC097504.1-201ENST00000515103 2415 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC78A2IDD5 OR14L1P-202ENST00000641545 3009 ntBASIC4.75□□□□□ -1.65
CCDC78A2IDD5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 ELF2P3-201ENST00000445099 1506 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 RN7SKP226-201ENST00000364912 300 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 MIR1305-201ENST00000408300 86 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 RSU1P3-201ENST00000412878 835 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC008280.1-201ENST00000418851 412 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 FABP7P1-201ENST00000424004 391 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC109583.1-201ENST00000432156 268 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 NANOGNBP1-201ENST00000448444 480 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 USP9YP12-201ENST00000450481 570 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 RPS29P33-201ENST00000456717 146 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 RPL9P6-201ENST00000492764 598 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 KCTD9P2-201ENST00000512203 1013 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 OR7H2P-201ENST00000513483 306 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC108064.1-201ENST00000513791 460 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC022878.1-201ENST00000530684 149 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AP004247.1-201ENST00000531556 1289 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 DYNLL1P4-201ENST00000549314 266 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC079075.1-201ENST00000559543 878 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 MIR4719-201ENST00000585233 84 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 BNIP3P30-201ENST00000601184 574 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 IMMP1LP1-201ENST00000605170 488 ntBASIC4.74□□□□□ -1.65
CCDC78A2IDD5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC78A2IDD5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 Y_RNA.97-201ENST00000363094 102 ntBASIC4.73□□□□□ -1.65
CCDC78A2IDD5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 RNU6-444P-201ENST00000383988 108 ntBASIC4.73□□□□□ -1.65
CCDC78A2IDD5 MTCYBP36-201ENST00000404146 440 ntBASIC4.73□□□□□ -1.65
CCDC78A2IDD5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC78A2IDD5 VN1R8P-201ENST00000407739 893 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms