Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX9Q9Y5X1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RNU5A-2P-201ENST00000384337 116 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RNU6-757P-201ENST00000410334 100 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RNA5SP80-201ENST00000410475 111 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RPL7P2-201ENST00000427639 268 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 VDAC1P6-201ENST00000430062 855 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC105402.2-201ENST00000438503 358 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 USP9YP22-201ENST00000438971 294 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 MTND5P2-201ENST00000442927 1142 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL606662.1-201ENST00000445763 553 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RPL21P134-201ENST00000453468 483 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RFC5P1-201ENST00000454419 874 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RPL5P24-201ENST00000463742 885 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC092045.1-201ENST00000495716 1231 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC116353.3-201ENST00000511215 249 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 COX6B1P6-201ENST00000522347 255 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 MTCO1P47-201ENST00000523889 1271 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC090888.1-201ENST00000561335 1141 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC106785.1-201ENST00000565935 262 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 RN7SL703P-201ENST00000578485 302 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 MIR4644-201ENST00000579929 84 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC090312.2-201ENST00000582687 378 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL022161.1-201ENST00000604390 213 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC009090.3-201ENST00000616553 565 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL603755.1-201ENST00000619504 163 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AC124312.6-202ENST00000623624 418 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL773545.4-201ENST00000637262 310 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 AL513478.4-201ENST00000641636 310 ntBASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX9Q9Y5X1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 ZNF542P-204ENST00000482727 1305 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AL512646.1-201ENST00000269395 1077 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 GSTA8P-201ENST00000404253 637 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 HNRNPDP2-201ENST00000406475 478 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 MIR1183-201ENST00000408856 89 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC006960.1-201ENST00000419980 153 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 GTF2IP23-201ENST00000423746 351 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AL593851.1-201ENST00000426171 157 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AL390023.1-201ENST00000428836 262 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 UBE2V1P1-201ENST00000430836 445 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 ATP5F1P1-201ENST00000433775 569 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 RPS29P7-201ENST00000439662 171 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC093155.1-201ENST00000440164 826 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 MTCYBP16-201ENST00000509187 1129 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 RN7SKP283-201ENST00000517197 270 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC008562.1-201ENST00000521763 330 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AP001317.1-201ENST00000531194 960 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms