Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 Y_RNA.399-201ENST00000383955 105 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-784P-201ENST00000384330 106 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AL583834.1-201ENST00000406943 343 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-1050P-201ENST00000410388 107 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-603P-201ENST00000411403 107 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 PPIAP10-201ENST00000438675 458 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC234771.2-201ENST00000445718 597 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 snoU13.29-201ENST00000459370 104 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-635P-201ENST00000516651 102 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC022360.1-201ENST00000521058 340 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AP001922.4-201ENST00000526967 290 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AP001858.2-201ENST00000536213 601 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC008521.1-201ENST00000587471 187 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 ATP1B3P1-201ENST00000605365 821 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL12P48-201ENST00000605620 304 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC145423.1-201ENST00000605712 336 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC100812.1-201ENST00000607622 580 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC009229.3-201ENST00000608056 282 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AC005899.6-201ENST00000620729 297 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 IQCB2P-201ENST00000401788 1633 ntBASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDHGA11Q9Y5H2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AL137003.2-201ENST00000606924 2538 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU1-49P-201ENST00000363468 159 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA43.1-201ENST00000364863 140 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA64.3-201ENST00000365647 134 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SET-203ENST00000372688 801 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORD70.1-201ENST00000391007 85 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AL133260.1-201ENST00000405720 405 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AL139805.1-201ENST00000407837 289 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL21P24-201ENST00000413752 448 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RSL24D1P6-201ENST00000426934 401 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC016027.5-201ENST00000427227 210 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AL360081.1-201ENST00000428299 555 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AL356121.1-201ENST00000442911 156 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 DYNLL1P5-201ENST00000467158 270 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC092451.1-201ENST00000480211 153 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RBBP4P6-201ENST00000508098 202 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC026801.2-201ENST00000515352 425 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-470P-201ENST00000515954 104 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA70.11-201ENST00000515987 138 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA70.13-201ENST00000516116 138 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 GNAI2P1-201ENST00000541815 315 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC063977.7-201ENST00000594454 337 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 NUTF2P8-201ENST00000604593 363 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SNHG22-203ENST00000617833 660 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC089999.3-201ENST00000622440 577 ntBASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms