Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AL353662.3-201ENST00000625131 237 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 HAUS6P2-201ENST00000433254 2404 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 NXPH1-205ENST00000602349 1953 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC009948.3-201ENST00000603415 1798 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC009902.3-201ENST00000606235 2172 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 MIR517A-201ENST00000385001 87 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 MIR628-201ENST00000385229 95 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 MIR320B1-201ENST00000390209 79 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AP003170.5-201ENST00000397185 335 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC114491.1-201ENST00000416095 246 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 RPL35AP31-201ENST00000418340 337 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 PSMA2P3-201ENST00000429685 675 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC112187.1-201ENST00000455837 479 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC114982.1-201ENST00000469402 321 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AL359273.1-201ENST00000510918 627 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 RNA5SP340-201ENST00000517132 107 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC027667.1-201ENST00000545814 304 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 CYCSP38-201ENST00000559840 322 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC108706.1-201ENST00000611053 297 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 FAM27E2-201ENST00000619668 403 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 AC112255.1-201ENST00000624070 2493 ntBASIC8.01□□□□□ -1.13
TRIM35Q9UPQ4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 PRO1804-201ENST00000623780 2050 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 COX6B1P3-201ENST00000312310 260 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 RNA5SP375-201ENST00000362975 119 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 RN7SKP275-201ENST00000364626 301 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 RNU6-658P-201ENST00000384606 106 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 SNORD70.1-201ENST00000391007 85 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 RNA5SP156-201ENST00000410250 110 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 RNU6-1135P-201ENST00000411083 103 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AC010881.1-201ENST00000433830 235 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 FTLP8-201ENST00000446770 267 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 HMGN3P1-201ENST00000453847 193 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AP000893.1-201ENST00000474462 794 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 UBA52P3-201ENST00000491303 382 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AC008945.1-201ENST00000505144 499 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 SCARNA24.2-201ENST00000516968 130 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 SAMMSON-226ENST00000642089 1582 ntBASIC8□□□□□ -1.13
TRIM35Q9UPQ4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM35Q9UPQ4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 RNU105B-201ENST00000364478 208 ntBASIC7.99□□□□□ -1.13
TRIM35Q9UPQ4 SNORA16.2-201ENST00000390991 127 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms