Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC126177.3-201ENST00000551839 688 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 ZNF271P-202ENST00000465539 1970 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC008568.2-201ENST00000623862 2313 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RNU6-661P-201ENST00000362409 107 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RNU6-253P-201ENST00000384730 105 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 EI24P2-201ENST00000397776 1076 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 TPMTP3-201ENST00000411928 735 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 HMGB3P20-201ENST00000417997 600 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AL445528.1-201ENST00000426330 420 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 OR2B8P-201ENST00000432841 938 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 ANP32BP2-201ENST00000454525 545 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC117522.3-201ENST00000507974 584 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 NPM1P5-201ENST00000557228 838 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC020914.4-201ENST00000597690 277 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AL590290.1-201ENST00000405336 380 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 CR383656.8-201ENST00000549046 145 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 PRELID3BP8-201ENST00000604148 295 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC007318.2-201ENST00000620999 243 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
MACF1Q9UPN3 AC007159.1-201ENST00000566529 4706 ntBASIC1.21□□□□□ -2.21
MACF1Q9UPN3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 BX276092.6-201ENST00000430476 250 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC069285.2-201ENST00000440210 275 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 BX276092.8-201ENST00000455722 250 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC100770.1-201ENST00000532310 322 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC006020.1-201ENST00000420179 1854 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 CST2P1-201ENST00000425770 87 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 SUMO2P20-201ENST00000520803 283 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC112198.1-201ENST00000505369 1220 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC011604.1-201ENST00000545978 196 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC093388.1-201ENST00000609166 430 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 CTSLP2-204ENST00000629029 392 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 MIR622-201ENST00000638396 96 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 FAM35BP-202ENST00000497389 3337 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC135776.4-201ENST00000624300 1904 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 MTCO1P22-201ENST00000604619 1360 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 MTND2P9-201ENST00000422293 931 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 RPL37P4-201ENST00000448908 268 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC104472.2-201ENST00000469035 601 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC087385.1-201ENST00000475062 312 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AL133247.2-201ENST00000603236 482 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AL022099.1-201ENST00000604551 712 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC006840.1-201ENST00000623069 542 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms