Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 BTF3P5-201ENST00000457252 467 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 RPL32P34-201ENST00000486380 400 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 MIR5680-201ENST00000577577 84 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 SNRPGP15-201ENST00000600149 222 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 AL606834.2-201ENST00000602954 668 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 MTCO1P24-201ENST00000515438 1558 ntBASIC2.95□□□□□ -1.94
VPS29Q9UBQ0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 MTCO1P8-201ENST00000416914 1523 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 MTND5P27-201ENST00000428871 1720 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC093831.2-201ENST00000624393 3427 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 MIR7-3-201ENST00000384898 110 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AL590399.6-201ENST00000446396 307 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 VN1R34P-201ENST00000447387 883 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 BX276092.4-201ENST00000452056 248 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 RN7SL20P-201ENST00000488827 297 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AP000619.3-201ENST00000535634 1127 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AP004372.1-201ENST00000604842 844 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC016877.3-201ENST00000606778 504 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 FAM157B-203ENST00000639350 358 ntBASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS29Q9UBQ0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC093908.1-201ENST00000623125 8092 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 MTND4P34-201ENST00000572715 1371 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 RPL23AP57-201ENST00000332361 466 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 RPL31P1-201ENST00000398116 372 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 RNU2-21P-201ENST00000410368 188 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC244098.2-201ENST00000422068 99 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 OR51AB1P-201ENST00000429046 620 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC091862.1-201ENST00000438016 1100 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 TPTE2P6-202ENST00000445572 1007 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC016696.1-201ENST00000446949 318 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 NF1P3-201ENST00000457709 450 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 RN7SL601P-201ENST00000471221 293 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 RPL7P5-201ENST00000471472 736 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 MTCYBP41-201ENST00000528913 1123 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AP002812.4-201ENST00000532139 286 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AL163153.1-201ENST00000554223 283 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 ZNF92P3-201ENST00000596594 954 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 MIR6798-201ENST00000612887 67 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 NF1P10-201ENST00000613227 742 ntBASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 MTND4P31-201ENST00000425607 1343 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms