Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC020890.1-201ENST00000491837 504 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 RNY4P37-201ENST00000516225 96 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 SNORA48.10-201ENST00000516965 160 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC022790.1-201ENST00000522872 204 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC087477.6-201ENST00000559595 843 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 MIR5096-201ENST00000583713 70 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC012065.4-201ENST00000602445 679 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC090186.1-201ENST00000605991 572 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 AC008498.1-201ENST00000613012 531 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 U3.53-201ENST00000628922 216 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 IQCB2P-201ENST00000401788 1633 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 OR5BR1P-201ENST00000524992 1330 ntBASIC4.7□□□□□ -1.66
DKK3Q9UBP4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DKK3Q9UBP4 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC007390.2-201ENST00000606229 3803 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL079343.1-201ENST00000572358 1771 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 RNU6-251P-201ENST00000363235 104 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 OR6C69P-201ENST00000394268 893 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 MTND4LP11-201ENST00000422184 280 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 EIF4EP1-201ENST00000422311 642 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC093698.1-201ENST00000423843 571 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 RPL18P10-201ENST00000425606 538 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL365184.2-201ENST00000431139 435 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 B3GNT2P1-201ENST00000434960 952 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 RPL26P28-201ENST00000451325 435 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 RPL37P3-201ENST00000456825 293 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL445433.1-201ENST00000457507 257 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 ARPC3P2-201ENST00000457786 533 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC007016.1-201ENST00000512110 244 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC116347.2-201ENST00000514912 523 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AP003392.2-201ENST00000527269 208 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AP001004.1-201ENST00000582468 324 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 KPNA2P3-201ENST00000584190 848 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC020910.2-201ENST00000603635 610 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AP002360.4-201ENST00000606980 481 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AL354760.1-201ENST00000608357 643 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC079228.1-201ENST00000624774 1049 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AP000843.1-201ENST00000624880 701 ntBASIC4.69□□□□□ -1.66
DKK3Q9UBP4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DKK3Q9UBP4 AC009951.1-201ENST00000623674 2614 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms