Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNA5SP479-201ENST00000364858 117 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC019155.1-201ENST00000382242 574 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MIR659-201ENST00000384963 97 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MIR3065-201ENST00000390137 79 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC004987.3-201ENST00000413879 771 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS23P10-201ENST00000416185 486 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS15AP40-201ENST00000419621 391 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC096632.1-201ENST00000427395 310 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPEP2-201ENST00000432149 701 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC129850.1-201ENST00000436203 508 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND1P34-201ENST00000438556 671 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL23AP43-201ENST00000446445 471 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 ELOCP30-201ENST00000447108 299 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND2P19-201ENST00000449129 1012 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS27AP17-201ENST00000463344 455 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND1P16-201ENST00000465177 898 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS20P21-201ENST00000466859 343 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL7P19-201ENST00000469948 618 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AP000893.1-201ENST00000474462 794 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL30P6-201ENST00000475925 342 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC013828.1-201ENST00000481845 158 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC105137.1-201ENST00000484355 562 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RN7SL812P-201ENST00000493791 279 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MTCYBP20-201ENST00000524239 1129 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 PHBP17-201ENST00000528576 541 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC023161.2-201ENST00000551218 780 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AL031985.2-201ENST00000600955 480 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 VN1R85P-201ENST00000601587 426 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC006539.2-201ENST00000601729 572 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC009220.3-201ENST00000604318 586 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC113403.1-201ENST00000604910 193 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC024941.1-201ENST00000612250 334 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC008083.4-201ENST00000615076 444 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC140479.6-201ENST00000633535 357 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC011266.1-201ENST00000624119 3569 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC087359.1-201ENST00000508335 1740 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 Y_RNA.25-201ENST00000362528 102 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RNA5SP388-201ENST00000362584 119 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RNU6-251P-201ENST00000363235 104 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 SNORD74.4-201ENST00000364129 80 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RNU4-75P-201ENST00000364621 146 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RNU6-621P-201ENST00000364752 109 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RNU6-921P-201ENST00000384361 107 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 Y_RNA.560-201ENST00000384689 102 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 SNORA11F-201ENST00000408237 128 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC069218.2-201ENST00000411665 344 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS20P14-201ENST00000412545 360 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 NPM1P11-201ENST00000417106 855 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AL022400.1-201ENST00000423946 935 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 NPM1P34-201ENST00000428821 893 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC244035.1-201ENST00000430042 390 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AL050321.1-201ENST00000432363 400 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC098826.1-201ENST00000433943 471 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL12P26-201ENST00000452430 487 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 SETP11-201ENST00000473027 690 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 AC010301.1-201ENST00000473936 355 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 ACTG1P13-201ENST00000486987 1043 ntBASIC4.35□□□□□ -1.71
NCKIPSDQ9NZQ3 HMGB1P21-201ENST00000502313 581 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms