Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RPS3AP36-201ENST00000398190 775 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AP000580.1-201ENST00000404439 358 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 FAR2P2-201ENST00000413041 594 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC093162.1-201ENST00000419682 124 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 FAR2P4-202ENST00000425399 584 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 RPS29P22-201ENST00000472363 168 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC021382.1-201ENST00000483523 359 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 RPL23AP41-201ENST00000484754 458 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC109462.1-201ENST00000491087 368 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 RPL23AP72-201ENST00000492447 435 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC109927.2-201ENST00000506416 303 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC126177.5-201ENST00000549599 178 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 TPRKBP2-201ENST00000565969 475 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC009101.1-201ENST00000568135 242 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AL391840.1-201ENST00000571144 367 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 CYCSP40-201ENST00000575927 294 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 DUXAP4-201ENST00000603046 613 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC115621.1-201ENST00000604653 858 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AP003117.2-201ENST00000606010 545 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC105429.2-201ENST00000610567 517 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC079597.1-201ENST00000624306 508 ntBASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.81□□□□□ -1.64
CCM2LQ9NUG4 AC093536.2-201ENST00000565257 1406 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC012020.1-201ENST00000624541 1728 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AL049555.1-201ENST00000562834 1933 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 DHX9P1-201ENST00000436565 3076 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 RNA5SP90-201ENST00000364801 99 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 MIR181A1-201ENST00000385026 110 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 U3.20-201ENST00000390909 217 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AL109941.1-201ENST00000401925 229 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AL133388.1-201ENST00000404509 287 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 OR4K12P-201ENST00000406538 961 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 RAB28P1-201ENST00000411517 641 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 RPL26P29-201ENST00000415623 438 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 CKS1BP6-201ENST00000424932 240 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 Z95327.1-201ENST00000446082 482 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC091180.1-201ENST00000462104 372 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC004924.1-201ENST00000480160 781 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 MTND1P3-201ENST00000484956 952 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC011352.1-201ENST00000512300 793 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AP003385.6-201ENST00000531603 374 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 OR8L1P-201ENST00000534005 955 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 SETP2-201ENST00000553886 926 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC006116.3-201ENST00000592968 361 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC004853.1-201ENST00000604902 698 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC000068.2-201ENST00000608816 460 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC024941.1-201ENST00000612250 334 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms