Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 CCNG2P1-201ENST00000549521 1000 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 MIR4474-201ENST00000579189 78 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 ELL2P4-201ENST00000446870 1376 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC116096.1-201ENST00000566804 2314 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 MIR449B-201ENST00000384995 97 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AC063979.1-201ENST00000415539 377 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AC097713.2-201ENST00000430199 356 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AC125238.1-201ENST00000448842 249 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 ELOCP23-201ENST00000452014 332 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 ARPC3P2-201ENST00000457786 533 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 TMEM248P1-201ENST00000510579 951 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 RNA5SP217-201ENST00000515959 91 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 UBE2NP1-201ENST00000545592 458 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 U6.105-201ENST00000637379 88 ntBASIC3.22□□□□□ -1.89
TREX1Q9NSU2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.22□□□□□ -1.89
TREX1Q9NSU2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 MTND5P24-201ENST00000438892 1767 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 RAD1P1-201ENST00000231383 813 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 SNORD115-48-201ENST00000364764 76 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 MIR183-201ENST00000384958 110 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 HMGB3P23-201ENST00000414981 585 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 LINC01347-201ENST00000417964 355 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 OR1AA1P-201ENST00000419597 916 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 XKRY2-201ENST00000442362 1093 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 Z95327.1-201ENST00000446082 482 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 SNORA84-201ENST00000459229 133 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 ST13P14-201ENST00000474095 734 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC073522.1-201ENST00000483312 377 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 MTND4LP22-201ENST00000508209 276 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 TXNP6-201ENST00000510190 310 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 SNORA48.9-201ENST00000516419 162 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 MTCYBP41-201ENST00000528913 1123 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 ZNF415P1-201ENST00000582279 1166 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 CKS1BP3-201ENST00000600888 237 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC018618.2-201ENST00000604770 446 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC245389.1-201ENST00000605141 529 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AC015849.2-201ENST00000605738 409 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AL355802.4-201ENST00000607635 548 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 AL450489.1-201ENST00000612071 468 ntBASIC3.21□□□□□ -1.9
TREX1Q9NSU2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TREX1Q9NSU2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC069540.1-201ENST00000446320 988 ntBASIC3.2□□□□□ -1.9
TREX1Q9NSU2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms