Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC023598.1-201ENST00000472521 361 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AL049874.2-201ENST00000492636 288 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC006499.2-201ENST00000513470 337 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AL109766.1-201ENST00000555080 552 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AP001180.3-201ENST00000582221 145 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC115085.1-201ENST00000588924 229 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 BNIP3P22-201ENST00000593399 556 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 RPL12P25-202ENST00000598100 674 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 PISRT1-201ENST00000626175 531 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC024614.3-201ENST00000637860 256 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC112487.2-201ENST00000637950 304 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 U8.3-201ENST00000363321 132 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RNA5SP447-201ENST00000363749 119 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RNU6-1151P-201ENST00000384684 107 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 SNORA57.1-201ENST00000391227 145 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL121972.1-201ENST00000402023 252 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RPL21P67-201ENST00000402896 478 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RPL12P34-201ENST00000424532 479 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 MRPS21P2-201ENST00000424704 264 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC008850.1-201ENST00000427546 362 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL353597.2-202ENST00000434901 373 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC002486.1-201ENST00000435098 391 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 ARPC3P1-201ENST00000437218 533 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC000111.2-201ENST00000448200 210 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 MTCO1P27-201ENST00000448269 226 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RPS20P24-201ENST00000457473 361 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC073073.1-201ENST00000493920 463 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 Y_RNA.693-201ENST00000516641 110 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RNU2-46P-201ENST00000517038 113 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AP003467.2-201ENST00000520175 319 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AF279873.1-201ENST00000523393 313 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 MIR3682-201ENST00000581338 84 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL049794.2-201ENST00000616301 365 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 CR381572.2-201ENST00000624852 397 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AL451142.2-201ENST00000429076 2090 ntBASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM7Q9NR12 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PDLIM7Q9NR12 ADAM5-202ENST00000399789 1942 ntBASIC5.46□□□□□ -1.53
PDLIM7Q9NR12 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.46□□□□□ -1.53
PDLIM7Q9NR12 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PDLIM7Q9NR12 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 USP9YP4-201ENST00000424401 1745 ntBASIC5.46□□□□□ -1.54
PDLIM7Q9NR12 SMG1P6-201ENST00000532337 2930 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms