Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AF235103.2-201ENST00000525753 346 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AP002748.2-201ENST00000528671 348 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC093012.1-202ENST00000549403 582 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 TRAV15-201ENST00000556680 249 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 HMGB1P33-201ENST00000563485 527 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AL133457.1-201ENST00000564251 987 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 MEMO1P5-201ENST00000604810 406 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AL592295.2-201ENST00000612578 206 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 RPSAP73-201ENST00000614820 330 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AC006065.6-201ENST00000625201 545 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS11Q9H270 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 HSPA8P18-201ENST00000439846 1928 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AL049555.1-201ENST00000562834 1933 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS11Q9H270 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS11Q9H270 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 SAGE4P-201ENST00000442271 3381 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS11Q9H270 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 RNU6-501P-201ENST00000364072 100 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC019155.1-201ENST00000382242 574 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 MIR649-201ENST00000384843 97 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 MTCYBP36-201ENST00000404146 440 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AL512422.1-201ENST00000407033 553 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS11Q9H270 EIF4HP2-201ENST00000424380 563 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 MTCO1P20-201ENST00000425366 358 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS11Q9H270 BX323845.1-201ENST00000432417 179 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AL450023.3-201ENST00000440592 271 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS11Q9H270 SPRYD7P1-201ENST00000443861 570 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC016724.1-201ENST00000453215 421 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AL691482.1-201ENST00000453255 87 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 ARPC3P2-201ENST00000457786 533 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 RPS17P2-201ENST00000461663 408 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC092757.1-201ENST00000467293 467 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC108751.2-201ENST00000469993 231 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC005726.1-201ENST00000494679 427 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 Y_RNA.704-201ENST00000516851 102 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 RNU6-430P-201ENST00000517078 107 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC067852.4-201ENST00000590314 478 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC073091.2-201ENST00000603205 907 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 HSPE1P14-201ENST00000605812 302 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC008121.3-201ENST00000618726 433 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC136475.10-201ENST00000620253 385 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
VPS11Q9H270 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS11Q9H270 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS11Q9H270 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS11Q9H270 AC117529.2-201ENST00000512159 2068 ntBASIC5.01□□□□□ -1.61
VPS11Q9H270 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS11Q9H270 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS11Q9H270 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VPS11Q9H270 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS11Q9H270 OR4G11P-202ENST00000642116 1414 ntBASIC5□□□□□ -1.61
VPS11Q9H270 Y_RNA.25-201ENST00000362528 102 ntBASIC5□□□□□ -1.61
VPS11Q9H270 RNU6-1243P-201ENST00000364028 107 ntBASIC5□□□□□ -1.61
VPS11Q9H270 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS11Q9H270 RNU6-738P-201ENST00000384531 106 ntBASIC5□□□□□ -1.61
VPS11Q9H270 MIR506-201ENST00000384998 124 ntBASIC5□□□□□ -1.61
VPS11Q9H270 SNORA40.3-201ENST00000390964 122 ntBASIC5□□□□□ -1.61
VPS11Q9H270 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS11Q9H270 AL592291.1-201ENST00000403830 352 ntBASIC5□□□□□ -1.61
VPS11Q9H270 AC004987.3-201ENST00000413879 771 ntBASIC5□□□□□ -1.61
VPS11Q9H270 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5□□□□□ -1.61
VPS11Q9H270 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms