Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF826P-207ENST00000622273 1910 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC007938.2-201ENST00000604666 2634 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.33-201ENST00000362591 102 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SKP227-201ENST00000364445 330 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU1-74P-201ENST00000384108 171 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.488-201ENST00000384403 102 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-21P-201ENST00000384710 107 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 Y_RNA.580-201ENST00000391004 95 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AP003170.5-201ENST00000397185 335 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RNA5SP56-201ENST00000410277 118 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-603P-201ENST00000411403 107 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RPL7AP73-201ENST00000413490 353 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL713922.1-201ENST00000416477 747 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 SSXP9-201ENST00000417503 292 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL162725.1-201ENST00000435405 301 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 CEACAMP7-201ENST00000444105 496 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 KNOP1P3-201ENST00000446933 426 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL034369.1-201ENST00000453808 477 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 U8.22-201ENST00000459141 133 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RPS26P21-201ENST00000475397 348 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL152P-201ENST00000484176 298 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC140059.1-201ENST00000489238 361 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 SNX18P23-201ENST00000510867 677 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RNU6-1095P-201ENST00000516148 108 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AP005660.1-201ENST00000522972 293 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC087257.2-201ENST00000538759 928 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL135978.1-201ENST00000553618 1266 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC103996.1-201ENST00000555468 102 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 NDUFA3P4-201ENST00000560814 250 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC026826.3-201ENST00000561747 158 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC136944.5-201ENST00000573021 151 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RN7SL786P-201ENST00000579130 298 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC116447.1-201ENST00000613153 453 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AL365222.1-201ENST00000614661 98 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC011471.4-201ENST00000638271 216 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 LRRC37A16P-202ENST00000586022 3725 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 TNPO1P2-201ENST00000426249 2665 ntBASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-1Q9BYR8 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AC083843.3-201ENST00000623679 2186 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AP001284.1-201ENST00000528393 2118 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 AP005435.3-201ENST00000531260 3198 ntBASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-1Q9BYR8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms