Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC074250.1-201ENST00000511117 192 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 FABP5P12-201ENST00000515543 389 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC103833.1-201ENST00000517442 172 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 HMGB1P46-201ENST00000520062 610 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC093331.1-201ENST00000521474 169 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC079148.1-201ENST00000565944 819 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 NF1P5-201ENST00000588287 448 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC084373.1-201ENST00000603311 235 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AC243654.2-201ENST00000612843 443 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AL442067.2-201ENST00000614033 363 ntBASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RSPO3Q9BXY4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.03□□□□□ -1.93
RSPO3Q9BXY4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 RNU6-792P-201ENST00000363490 107 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 HMGN1P24-201ENST00000412282 298 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC063979.1-201ENST00000415539 377 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 MTCYBP7-201ENST00000419540 1134 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC006960.1-201ENST00000419980 153 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 MTCO2P1-201ENST00000424648 477 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AL513321.1-201ENST00000441175 761 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC007000.2-201ENST00000442564 487 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 RPL23AP67-201ENST00000465341 474 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC093663.2-201ENST00000484625 313 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 RPL7P38-201ENST00000488396 739 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 RN7SKP116-201ENST00000516902 319 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 IGHV3-76-201ENST00000522465 295 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 OR5D17P-201ENST00000531492 978 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 MIR2682-201ENST00000580305 110 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC005242.1-201ENST00000585658 438 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 MTCO3P22-201ENST00000603219 784 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 ELOCP35-201ENST00000604289 336 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC026790.2-201ENST00000606282 430 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 uc_338.1-201ENST00000612113 180 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 SNORD39.4-201ENST00000620099 78 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC005858.4-201ENST00000623191 700 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC006065.5-201ENST00000623427 349 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 MTND5P24-201ENST00000438892 1767 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 RNF6P1-201ENST00000444889 1784 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 AC021755.1-201ENST00000559747 1447 ntBASIC3.02□□□□□ -1.93
RSPO3Q9BXY4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 ZNF542P-204ENST00000482727 1305 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL136520.1-201ENST00000600311 1322 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL355143.1-201ENST00000407101 841 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL606490.7-201ENST00000433136 191 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 TXNP1-201ENST00000441872 371 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AL627224.1-201ENST00000448334 444 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AC078857.1-201ENST00000469870 667 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 FCF1P8-201ENST00000510322 597 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 RN7SKP289-201ENST00000517244 295 ntBASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.01□□□□□ -1.93
RSPO3Q9BXY4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms