Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 AP003355.3-201ENST00000623465 114 ntBASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 FAM157B-203ENST00000639350 358 ntBASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 AC090337.1-201ENST00000579651 2074 ntBASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HDHD3Q9BSH5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 NMD3P1-201ENST00000439704 1488 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MIR620-201ENST00000385232 95 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 VN1R51P-201ENST00000411675 945 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPS7P13-201ENST00000413955 498 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPS3AP9-201ENST00000417027 792 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL31P12-201ENST00000422587 358 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL23AP82-202ENST00000427528 469 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AP000907.1-201ENST00000428428 510 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC008065.1-201ENST00000428525 348 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL31P54-201ENST00000429803 370 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL7P59-201ENST00000447700 943 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MRPL42P4-201ENST00000453267 443 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC006539.3-201ENST00000454258 129 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AL136097.1-201ENST00000456945 913 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RNU7-170P-201ENST00000459303 61 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 SNORD108-201ENST00000459332 71 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 CENPBD1P1-201ENST00000464061 469 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL6P9-201ENST00000466502 859 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC023598.1-201ENST00000472521 361 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RN7SL442P-201ENST00000473804 320 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 UBE2CP3-201ENST00000502715 450 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC011352.3-201ENST00000505162 593 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC119751.4-201ENST00000507498 357 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC008837.1-201ENST00000511513 412 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 NDUFB4P9-201ENST00000511646 388 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL7L1P13-201ENST00000511702 739 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RN7SKP277-201ENST00000516895 283 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 snoZ278.1-201ENST00000517059 112 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MIR2116-201ENST00000517221 80 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC107934.2-201ENST00000518653 310 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RANP9-201ENST00000519957 271 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 HMGB1P1-201ENST00000522557 636 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 NDUFS5P6-201ENST00000529136 295 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 OR4C2P-201ENST00000530855 1064 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MTCYBP28-201ENST00000566728 1132 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MIR4700-201ENST00000578311 74 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MIR5685-201ENST00000579080 79 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC090330.1-201ENST00000588646 764 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC144521.1-201ENST00000607148 956 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 VN1R74P-201ENST00000613259 503 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC104763.3-201ENST00000613765 618 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 AC058791.1-201ENST00000608412 3198 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 MTND5P28-201ENST00000438005 1594 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 DCAF13P1-201ENST00000495256 1330 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 DCAF13P3-201ENST00000561147 1334 ntBASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.91□□□□□ -1.94
HDHD3Q9BSH5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HDHD3Q9BSH5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HDHD3Q9BSH5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HDHD3Q9BSH5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HDHD3Q9BSH5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 AC093908.1-201ENST00000623125 8092 ntBASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 RPL7P27-201ENST00000403775 720 ntBASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 RSL24D1P1-201ENST00000404972 493 ntBASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 MTCO3P31-201ENST00000405526 789 ntBASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 Z99755.1-201ENST00000414048 380 ntBASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.9□□□□□ -1.95
HDHD3Q9BSH5 AL356968.1-201ENST00000416622 474 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms