Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 SNORD56.3-201ENST00000363507 71 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AL590290.1-201ENST00000405336 380 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 RANP7-201ENST00000418085 644 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 PTP4A1P5-201ENST00000420305 455 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 MTCO1P52-201ENST00000433928 531 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AC015911.5-201ENST00000587076 451 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AL135786.1-201ENST00000415892 214 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 ARL2BPP6-201ENST00000512757 439 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 U3.6-201ENST00000363622 211 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AL049610.1-201ENST00000423374 372 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 Z82195.1-201ENST00000604558 398 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 GABRG2-229ENST00000641017 3628 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AL121882.1-201ENST00000422893 417 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AC008716.1-201ENST00000511084 513 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 MIR2276-201ENST00000516886 89 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 SETP1-201ENST00000556014 845 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AC233280.2-201ENST00000603917 1070 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 VN1R9P-201ENST00000614184 867 ntBASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
CSMD1Q96PZ7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 SNORA25.9-201ENST00000365087 128 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 MIR27B-201ENST00000385129 97 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC127526.1-201ENST00000417526 366 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 snoU13.18-201ENST00000459483 104 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 SNORA31.21-201ENST00000517180 77 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC091903.1-201ENST00000624322 454 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 RPS20P5-201ENST00000434808 360 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC022882.1-201ENST00000532142 501 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC007424.1-203ENST00000554613 687 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AC010620.2-201ENST00000600135 313 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 OR10AB1P-202ENST00000641219 1686 ntBASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CSMD1Q96PZ7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.28□□□□□ -2.05
CSMD1Q96PZ7 TAF9P1-201ENST00000445421 515 ntBASIC2.28□□□□□ -2.05
CSMD1Q96PZ7 TAF9P2-201ENST00000454958 515 ntBASIC2.28□□□□□ -2.05
CSMD1Q96PZ7 TRBV1-201ENST00000476502 284 ntBASIC2.28□□□□□ -2.05
CSMD1Q96PZ7 AC019080.5-201ENST00000624891 757 ntBASIC2.28□□□□□ -2.05
CSMD1Q96PZ7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.28□□□□□ -2.05
CSMD1Q96PZ7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 AC126121.1-201ENST00000482313 553 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 Z82217.1-201ENST00000625157 8149 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms