Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
AP1S3Q96PC3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.34□□□□□ -2.04
AP1S3Q96PC3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
AP1S3Q96PC3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
AP1S3Q96PC3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 RNU4-35P-201ENST00000362588 141 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 RNU6-618P-201ENST00000363518 112 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 NUP35P2-201ENST00000416748 943 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC005517.2-201ENST00000424673 553 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 C4BPAP2-201ENST00000428434 478 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 OR51AB1P-201ENST00000429046 620 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 PSMA2P3-201ENST00000429685 675 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 ATP5C1P1-201ENST00000441945 895 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 NOTCH2P1-201ENST00000443481 624 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 RPS24P6-201ENST00000452670 400 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC020898.1-201ENST00000474167 787 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC025518.1-201ENST00000479856 347 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AP004217.1-201ENST00000480579 346 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 ACTR6P1-201ENST00000514311 1104 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC034244.2-201ENST00000514668 858 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 RNU6-1308P-201ENST00000516817 103 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AL031985.2-201ENST00000600955 480 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC073387.2-201ENST00000604797 784 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AL590392.1-201ENST00000604960 446 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC090525.3-201ENST00000605601 189 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 AC020923.1-201ENST00000624021 917 ntBASIC2.33□□□□□ -2.04
AP1S3Q96PC3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.33□□□□□ -2.04
AP1S3Q96PC3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNA5SP119-201ENST00000362715 117 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 SNORA70.2-201ENST00000364506 135 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 CD24P4-201ENST00000382840 243 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNU1-109P-201ENST00000383960 147 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNU6-1293P-201ENST00000384077 107 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNU6-167P-201ENST00000384292 106 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 SNORD17-201ENST00000390930 237 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNA5SP274-201ENST00000410484 108 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 SMC4P1-201ENST00000414479 527 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC073063.1-201ENST00000434352 607 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC092641.1-201ENST00000440229 772 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RPL23AP20-201ENST00000447965 421 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 CYCSP35-201ENST00000451978 304 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 NPM1P13-201ENST00000452663 865 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AP002345.1-201ENST00000456493 928 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RPL7P15-201ENST00000461190 712 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RPL7P38-201ENST00000488396 739 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC104619.4-201ENST00000510773 249 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNU6-1004P-201ENST00000516584 111 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC092868.3-201ENST00000560515 784 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC007224.1-201ENST00000564410 144 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC006504.3-201ENST00000586818 523 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RPL23AP88-201ENST00000605759 454 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 uc_338.25-201ENST00000613756 156 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC006249.1-201ENST00000621223 471 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 RNU6-156P-201ENST00000621869 107 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AL356490.1-201ENST00000623079 479 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 AL136520.1-201ENST00000600311 1322 ntBASIC2.32□□□□□ -2.04
AP1S3Q96PC3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP1S3Q96PC3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
AP1S3Q96PC3 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms