Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR4260-201ENST00000583107 67 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC068020.1-201ENST00000594215 661 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC130352.1-201ENST00000602979 661 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC011468.4-201ENST00000603942 409 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC103858.2-201ENST00000621471 543 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC092608.2-201ENST00000624427 218 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 MTCO1P7-201ENST00000419523 1542 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC011978.2-201ENST00000569835 2054 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AL359955.1-201ENST00000455242 3275 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RNU6-545P-201ENST00000362681 104 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RNU6-38P-201ENST00000384085 107 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 NDUFS5P1-201ENST00000405668 289 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SNORA11C-201ENST00000408532 129 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 BOLA3P4-201ENST00000418151 400 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 EIF1P2-201ENST00000428233 350 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RPS3AP38-201ENST00000435889 763 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 MRPS21P3-201ENST00000436696 262 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AL450996.1-201ENST00000445574 1202 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 DDX3P2-201ENST00000446138 111 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RNU6-333P-201ENST00000459117 107 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC097493.1-201ENST00000463958 372 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RN7SL583P-201ENST00000475692 287 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 DEFB109F-201ENST00000491870 277 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RPSAP51-201ENST00000497462 645 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC108120.2-201ENST00000512973 294 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SCARNA6.1-201ENST00000516989 238 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RNA5SP454-201ENST00000517231 127 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AL049779.3-201ENST00000557141 606 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RN7SL708P-201ENST00000580952 299 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AC145423.1-201ENST00000605712 336 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RPL23AP61-201ENST00000623642 466 ntBASIC6.7□□□□□ -1.34
TRIM47Q96LD4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM47Q96LD4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 Y_RNA.46-201ENST00000362695 102 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 Y_RNA.380-201ENST00000365663 111 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 PPIAP9-201ENST00000403866 498 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 RN7SKP213-201ENST00000410746 298 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 VDAC1P9-201ENST00000412766 841 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM47Q96LD4 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC113412.1-201ENST00000425840 504 ntBASIC6.69□□□□□ -1.34
TRIM47Q96LD4 AC006548.1-201ENST00000427470 102 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms